Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
NFKB1P19838 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
NFKB1P19838 CROCCP1-201ENST00000426910 5675 ntBASIC17.11■□□□□ 0.33
NFKB1P19838 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
NFKB1P19838 AL671710.1-201ENST00000610245 2349 ntBASIC17.1■□□□□ 0.33
NFKB1P19838 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
NFKB1P19838 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NFKB1P19838 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
NFKB1P19838 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NFKB1P19838 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
NFKB1P19838 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
NFKB1P19838 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NFKB1P19838 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC17.1■□□□□ 0.33
NFKB1P19838 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
NFKB1P19838 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC17.1■□□□□ 0.33
NFKB1P19838 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC17.1■□□□□ 0.33
NFKB1P19838 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NFKB1P19838 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
NFKB1P19838 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC17.1■□□□□ 0.33
NFKB1P19838 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC17.1■□□□□ 0.33
NFKB1P19838 AC108751.1-201ENST00000490852 363 ntBASIC17.1■□□□□ 0.33
NFKB1P19838 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
NFKB1P19838 AL662844.1-201ENST00000546340 181 ntBASIC17.1■□□□□ 0.33
NFKB1P19838 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC17.1■□□□□ 0.33
NFKB1P19838 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC17.1■□□□□ 0.33
NFKB1P19838 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
NFKB1P19838 AL121894.2-201ENST00000602977 491 ntBASIC17.1■□□□□ 0.33
NFKB1P19838 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC17.1■□□□□ 0.33
NFKB1P19838 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC17.1■□□□□ 0.33
NFKB1P19838 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
NFKB1P19838 AC129492.6-201ENST00000611383 1305 ntBASIC17.1■□□□□ 0.33
NFKB1P19838 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC17.1■□□□□ 0.33
NFKB1P19838 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
NFKB1P19838 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
NFKB1P19838 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NFKB1P19838 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
NFKB1P19838 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NFKB1P19838 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NFKB1P19838 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
NFKB1P19838 AL353732.1-201ENST00000569618 1459 ntBASIC17.1■□□□□ 0.33
NFKB1P19838 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
NFKB1P19838 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
NFKB1P19838 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NFKB1P19838 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC17.1■□□□□ 0.33
NFKB1P19838 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NFKB1P19838 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC17.09■□□□□ 0.33
NFKB1P19838 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NFKB1P19838 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC17.09■□□□□ 0.33
NFKB1P19838 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
NFKB1P19838 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NFKB1P19838 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
NFKB1P19838 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC17.09■□□□□ 0.33
NFKB1P19838 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NFKB1P19838 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
NFKB1P19838 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NFKB1P19838 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NFKB1P19838 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
NFKB1P19838 AC093909.1-201ENST00000504731 1122 ntBASIC17.09■□□□□ 0.33
NFKB1P19838 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC17.09■□□□□ 0.33
NFKB1P19838 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
NFKB1P19838 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC17.09■□□□□ 0.33
NFKB1P19838 MIR4751-201ENST00000578027 74 ntBASIC17.09■□□□□ 0.33
NFKB1P19838 BSG-214ENST00000614867 960 ntTSL 3 BASIC17.09■□□□□ 0.33
NFKB1P19838 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC17.09■□□□□ 0.33
NFKB1P19838 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC17.09■□□□□ 0.33
NFKB1P19838 HLA-A-201ENST00000376802 1334 ntBASIC17.09■□□□□ 0.33
NFKB1P19838 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
NFKB1P19838 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
NFKB1P19838 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC17.09■□□□□ 0.33
NFKB1P19838 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC17.09■□□□□ 0.33
NFKB1P19838 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NFKB1P19838 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
NFKB1P19838 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
NFKB1P19838 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
NFKB1P19838 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC17.09■□□□□ 0.33
NFKB1P19838 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC17.09■□□□□ 0.33
NFKB1P19838 ALOX12P2-203ENST00000570921 1945 ntBASIC17.09■□□□□ 0.33
NFKB1P19838 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
NFKB1P19838 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
NFKB1P19838 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC17.09■□□□□ 0.33
NFKB1P19838 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
NFKB1P19838 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
NFKB1P19838 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
NFKB1P19838 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
NFKB1P19838 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
NFKB1P19838 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
NFKB1P19838 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC17.08■□□□□ 0.33
NFKB1P19838 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
NFKB1P19838 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
NFKB1P19838 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
NFKB1P19838 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
NFKB1P19838 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC17.08■□□□□ 0.33
NFKB1P19838 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC17.08■□□□□ 0.33
NFKB1P19838 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC17.08■□□□□ 0.33
NFKB1P19838 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
NFKB1P19838 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
NFKB1P19838 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
NFKB1P19838 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
NFKB1P19838 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
NFKB1P19838 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC17.08■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms