Protein–RNA interactions for Protein: P19013

KRT4, Keratin, type II cytoskeletal 4, humanhuman

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT4P19013 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
KRT4P19013 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
KRT4P19013 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
KRT4P19013 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC16.94■□□□□ 0.3
KRT4P19013 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
KRT4P19013 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
KRT4P19013 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC16.94■□□□□ 0.3
KRT4P19013 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
KRT4P19013 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC16.94■□□□□ 0.3
KRT4P19013 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC16.93■□□□□ 0.3
KRT4P19013 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
KRT4P19013 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
KRT4P19013 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
KRT4P19013 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
KRT4P19013 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
KRT4P19013 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
KRT4P19013 ACE-204ENST00000428043 5120 ntTSL 2 BASIC16.93■□□□□ 0.3
KRT4P19013 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
KRT4P19013 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
KRT4P19013 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
KRT4P19013 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC16.93■□□□□ 0.3
KRT4P19013 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
KRT4P19013 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
KRT4P19013 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
KRT4P19013 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
KRT4P19013 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC16.93■□□□□ 0.3
KRT4P19013 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC16.93■□□□□ 0.3
KRT4P19013 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
KRT4P19013 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC16.93■□□□□ 0.3
KRT4P19013 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
KRT4P19013 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC16.93■□□□□ 0.3
KRT4P19013 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC16.93■□□□□ 0.3
KRT4P19013 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC16.93■□□□□ 0.3
KRT4P19013 AC011467.2-201ENST00000598425 242 ntBASIC16.93■□□□□ 0.3
KRT4P19013 AC006011.2-201ENST00000621313 1158 ntBASIC16.93■□□□□ 0.3
KRT4P19013 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
KRT4P19013 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC16.93■□□□□ 0.3
KRT4P19013 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
KRT4P19013 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC16.93■□□□□ 0.3
KRT4P19013 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
KRT4P19013 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC16.93■□□□□ 0.3
KRT4P19013 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
KRT4P19013 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
KRT4P19013 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
KRT4P19013 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
KRT4P19013 AL596087.1-201ENST00000400979 1969 ntBASIC16.93■□□□□ 0.3
KRT4P19013 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
KRT4P19013 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC16.93■□□□□ 0.3
KRT4P19013 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
KRT4P19013 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
KRT4P19013 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
KRT4P19013 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
KRT4P19013 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC16.93■□□□□ 0.3
KRT4P19013 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
KRT4P19013 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC16.92■□□□□ 0.3
KRT4P19013 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
KRT4P19013 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC16.92■□□□□ 0.3
KRT4P19013 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
KRT4P19013 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC16.92■□□□□ 0.3
KRT4P19013 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
KRT4P19013 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
KRT4P19013 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
KRT4P19013 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
KRT4P19013 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
KRT4P19013 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
KRT4P19013 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
KRT4P19013 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
KRT4P19013 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
KRT4P19013 AC005521.1-201ENST00000393351 872 ntBASIC16.92■□□□□ 0.3
KRT4P19013 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC16.92■□□□□ 0.3
KRT4P19013 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC16.92■□□□□ 0.3
KRT4P19013 AC012306.2-201ENST00000609350 630 ntBASIC16.92■□□□□ 0.3
KRT4P19013 AC133561.5-201ENST00000635547 218 ntBASIC16.92■□□□□ 0.3
KRT4P19013 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC16.92■□□□□ 0.3
KRT4P19013 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
KRT4P19013 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC16.92■□□□□ 0.3
KRT4P19013 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
KRT4P19013 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
KRT4P19013 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
KRT4P19013 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
KRT4P19013 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
KRT4P19013 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
KRT4P19013 FOS-208ENST00000555686 1496 ntTSL 2 BASIC16.92■□□□□ 0.3
KRT4P19013 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC16.92■□□□□ 0.3
KRT4P19013 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
KRT4P19013 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
KRT4P19013 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
KRT4P19013 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC16.91■□□□□ 0.3
KRT4P19013 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
KRT4P19013 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
KRT4P19013 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC16.91■□□□□ 0.3
KRT4P19013 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
KRT4P19013 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC16.91■□□□□ 0.3
KRT4P19013 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC16.91■□□□□ 0.3
KRT4P19013 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
KRT4P19013 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
KRT4P19013 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
KRT4P19013 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
KRT4P19013 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
KRT4P19013 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 68.4 ms