Protein–RNA interactions for Protein: P17600

SYN1, Synapsin-1, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYN1P17600 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC18.11■□□□□ 0.49
SYN1P17600 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SYN1P17600 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
SYN1P17600 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SYN1P17600 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
SYN1P17600 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
SYN1P17600 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SYN1P17600 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC18.1■□□□□ 0.49
SYN1P17600 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SYN1P17600 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SYN1P17600 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
SYN1P17600 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
SYN1P17600 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC18.1■□□□□ 0.49
SYN1P17600 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SYN1P17600 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SYN1P17600 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
SYN1P17600 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SYN1P17600 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SYN1P17600 APOC3-202ENST00000375345 604 ntTSL 5 BASIC18.1■□□□□ 0.49
SYN1P17600 AC005229.1-201ENST00000392885 409 ntBASIC18.1■□□□□ 0.49
SYN1P17600 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SYN1P17600 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
SYN1P17600 AC099336.1-201ENST00000417053 1171 ntBASIC18.1■□□□□ 0.49
SYN1P17600 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC18.1■□□□□ 0.49
SYN1P17600 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC18.1■□□□□ 0.49
SYN1P17600 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC18.1■□□□□ 0.49
SYN1P17600 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC18.1■□□□□ 0.49
SYN1P17600 KLF2P4-201ENST00000451959 1225 ntBASIC18.1■□□□□ 0.49
SYN1P17600 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SYN1P17600 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC18.1■□□□□ 0.49
SYN1P17600 FTH1-202ENST00000526640 786 ntTSL 2 BASIC18.1■□□□□ 0.49
SYN1P17600 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC18.1■□□□□ 0.49
SYN1P17600 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC18.1■□□□□ 0.49
SYN1P17600 MIR3615-201ENST00000581999 87 ntBASIC18.1■□□□□ 0.49
SYN1P17600 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC18.1■□□□□ 0.49
SYN1P17600 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC18.1■□□□□ 0.49
SYN1P17600 LINC01451-201ENST00000623792 534 ntBASIC18.1■□□□□ 0.49
SYN1P17600 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC18.1■□□□□ 0.49
SYN1P17600 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC18.1■□□□□ 0.49
SYN1P17600 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC18.1■□□□□ 0.49
SYN1P17600 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SYN1P17600 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC18.1■□□□□ 0.49
SYN1P17600 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SYN1P17600 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SYN1P17600 CDC14C-201ENST00000428251 1719 ntBASIC18.09■□□□□ 0.49
SYN1P17600 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC18.09■□□□□ 0.49
SYN1P17600 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
SYN1P17600 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SYN1P17600 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
SYN1P17600 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC18.09■□□□□ 0.49
SYN1P17600 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC18.09■□□□□ 0.49
SYN1P17600 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
SYN1P17600 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SYN1P17600 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SYN1P17600 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
SYN1P17600 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
SYN1P17600 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
SYN1P17600 USP32P1-208ENST00000506594 1164 ntBASIC18.09■□□□□ 0.49
SYN1P17600 AGER-214ENST00000538695 487 ntTSL 2 BASIC18.09■□□□□ 0.49
SYN1P17600 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC18.09■□□□□ 0.49
SYN1P17600 RHOQP1-201ENST00000555758 579 ntBASIC18.09■□□□□ 0.49
SYN1P17600 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC18.09■□□□□ 0.49
SYN1P17600 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC18.09■□□□□ 0.49
SYN1P17600 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC18.09■□□□□ 0.49
SYN1P17600 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC18.09■□□□□ 0.49
SYN1P17600 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SYN1P17600 AL139099.5-201ENST00000635274 300 ntBASIC18.09■□□□□ 0.49
SYN1P17600 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
SYN1P17600 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SYN1P17600 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC18.09■□□□□ 0.49
SYN1P17600 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
SYN1P17600 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SYN1P17600 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
SYN1P17600 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SYN1P17600 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC18.09■□□□□ 0.49
SYN1P17600 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SYN1P17600 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SYN1P17600 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
SYN1P17600 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
SYN1P17600 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC18.08■□□□□ 0.49
SYN1P17600 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.49
SYN1P17600 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
SYN1P17600 TUBB1P2-201ENST00000422712 1306 ntBASIC18.08■□□□□ 0.49
SYN1P17600 TUBB1P1-201ENST00000503144 1300 ntBASIC18.08■□□□□ 0.49
SYN1P17600 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SYN1P17600 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC18.08■□□□□ 0.48
SYN1P17600 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SYN1P17600 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
SYN1P17600 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SYN1P17600 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC18.08■□□□□ 0.48
SYN1P17600 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SYN1P17600 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
SYN1P17600 SERBP1P3-201ENST00000459980 809 ntBASIC18.08■□□□□ 0.48
SYN1P17600 AC098859.1-201ENST00000502915 1238 ntBASIC18.08■□□□□ 0.48
SYN1P17600 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC18.08■□□□□ 0.48
SYN1P17600 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC18.08■□□□□ 0.48
SYN1P17600 ZFR2-208ENST00000592398 532 ntTSL 5 BASIC18.08■□□□□ 0.48
SYN1P17600 MIR8072-201ENST00000614241 80 ntBASIC18.08■□□□□ 0.48
SYN1P17600 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC18.08■□□□□ 0.48
SYN1P17600 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC18.08■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms