Protein–RNA interactions for Protein: P17544

ATF7, Cyclic AMP-dependent transcription factor ATF-7, humanhuman

Predicted RBP Predictions only

Length 494 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF7P17544 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
ATF7P17544 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
ATF7P17544 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
ATF7P17544 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
ATF7P17544 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
ATF7P17544 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC18.44■□□□□ 0.54
ATF7P17544 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
ATF7P17544 AC116353.5-201ENST00000638148 1699 ntBASIC18.44■□□□□ 0.54
ATF7P17544 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC18.44■□□□□ 0.54
ATF7P17544 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
ATF7P17544 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC18.43■□□□□ 0.54
ATF7P17544 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC18.43■□□□□ 0.54
ATF7P17544 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC18.43■□□□□ 0.54
ATF7P17544 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC18.43■□□□□ 0.54
ATF7P17544 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
ATF7P17544 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC18.43■□□□□ 0.54
ATF7P17544 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
ATF7P17544 EGFEM1P-202ENST00000431685 1563 ntBASIC18.43■□□□□ 0.54
ATF7P17544 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
ATF7P17544 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
ATF7P17544 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
ATF7P17544 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC18.43■□□□□ 0.54
ATF7P17544 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
ATF7P17544 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
ATF7P17544 HMGA1P7-201ENST00000406908 502 ntBASIC18.43■□□□□ 0.54
ATF7P17544 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC18.43■□□□□ 0.54
ATF7P17544 KRT8P48-201ENST00000515599 1220 ntBASIC18.43■□□□□ 0.54
ATF7P17544 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
ATF7P17544 THTPA-204ENST00000554970 569 ntTSL 4 BASIC18.43■□□□□ 0.54
ATF7P17544 THTPA-206ENST00000556015 535 ntTSL 3 BASIC18.43■□□□□ 0.54
ATF7P17544 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC18.43■□□□□ 0.54
ATF7P17544 MIR4515-201ENST00000584082 81 ntBASIC18.43■□□□□ 0.54
ATF7P17544 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
ATF7P17544 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
ATF7P17544 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
ATF7P17544 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC18.43■□□□□ 0.54
ATF7P17544 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC18.43■□□□□ 0.54
ATF7P17544 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
ATF7P17544 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC18.43■□□□□ 0.54
ATF7P17544 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
ATF7P17544 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
ATF7P17544 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
ATF7P17544 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
ATF7P17544 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC18.43■□□□□ 0.54
ATF7P17544 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
ATF7P17544 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC18.43■□□□□ 0.54
ATF7P17544 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC18.43■□□□□ 0.54
ATF7P17544 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
ATF7P17544 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
ATF7P17544 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC18.43■□□□□ 0.54
ATF7P17544 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC18.43■□□□□ 0.54
ATF7P17544 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
ATF7P17544 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC18.43■□□□□ 0.54
ATF7P17544 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
ATF7P17544 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC18.42■□□□□ 0.54
ATF7P17544 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
ATF7P17544 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC18.42■□□□□ 0.54
ATF7P17544 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC18.42■□□□□ 0.54
ATF7P17544 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC18.42■□□□□ 0.54
ATF7P17544 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
ATF7P17544 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
ATF7P17544 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC18.42■□□□□ 0.54
ATF7P17544 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
ATF7P17544 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
ATF7P17544 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC18.42■□□□□ 0.54
ATF7P17544 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC18.42■□□□□ 0.54
ATF7P17544 AC023141.5-201ENST00000458585 616 ntBASIC18.42■□□□□ 0.54
ATF7P17544 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
ATF7P17544 HLA-J-203ENST00000494367 1087 ntBASIC18.42■□□□□ 0.54
ATF7P17544 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
ATF7P17544 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC18.42■□□□□ 0.54
ATF7P17544 AC109322.1-201ENST00000524499 1264 ntBASIC18.42■□□□□ 0.54
ATF7P17544 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC18.42■□□□□ 0.54
ATF7P17544 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC18.42■□□□□ 0.54
ATF7P17544 AP001094.4-201ENST00000579008 2176 ntBASIC18.42■□□□□ 0.54
ATF7P17544 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
ATF7P17544 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
ATF7P17544 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
ATF7P17544 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
ATF7P17544 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
ATF7P17544 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
ATF7P17544 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
ATF7P17544 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
ATF7P17544 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
ATF7P17544 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC18.41■□□□□ 0.54
ATF7P17544 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
ATF7P17544 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
ATF7P17544 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
ATF7P17544 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
ATF7P17544 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
ATF7P17544 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC18.41■□□□□ 0.54
ATF7P17544 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC18.41■□□□□ 0.54
ATF7P17544 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
ATF7P17544 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
ATF7P17544 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
ATF7P17544 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
ATF7P17544 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
ATF7P17544 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
ATF7P17544 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
ATF7P17544 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms