Protein–RNA interactions for Protein: P16144

ITGB4, Integrin beta-4, humanhuman

Predictions only

Length 1,822 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4P16144 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
ITGB4P16144 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
ITGB4P16144 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ITGB4P16144 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
ITGB4P16144 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ITGB4P16144 GALT-202ENST00000450095 1280 ntTSL 2 BASIC21.18■□□□□ 0.98
ITGB4P16144 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
ITGB4P16144 AC123567.1-201ENST00000548294 1261 ntBASIC21.18■□□□□ 0.98
ITGB4P16144 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
ITGB4P16144 AL139011.1-202ENST00000642063 584 ntBASIC21.18■□□□□ 0.98
ITGB4P16144 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
ITGB4P16144 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
ITGB4P16144 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ITGB4P16144 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC21.18■□□□□ 0.98
ITGB4P16144 AL031731.1-201ENST00000642131 2094 ntBASIC21.18■□□□□ 0.98
ITGB4P16144 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC21.18■□□□□ 0.98
ITGB4P16144 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC21.18■□□□□ 0.98
ITGB4P16144 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
ITGB4P16144 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC21.18■□□□□ 0.98
ITGB4P16144 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ITGB4P16144 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC21.18■□□□□ 0.98
ITGB4P16144 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ITGB4P16144 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
ITGB4P16144 ANKRD19P-201ENST00000338192 862 ntBASIC21.18■□□□□ 0.98
ITGB4P16144 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
ITGB4P16144 RAD18-204ENST00000418463 563 ntTSL 4 BASIC21.18■□□□□ 0.98
ITGB4P16144 RAD18-205ENST00000421052 582 ntTSL 3 BASIC21.18■□□□□ 0.98
ITGB4P16144 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC21.18■□□□□ 0.98
ITGB4P16144 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC21.18■□□□□ 0.98
ITGB4P16144 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
ITGB4P16144 RAB43P1-201ENST00000561790 589 ntBASIC21.18■□□□□ 0.98
ITGB4P16144 RPSAP52-203ENST00000622976 1023 ntBASIC21.18■□□□□ 0.98
ITGB4P16144 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ITGB4P16144 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ITGB4P16144 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ITGB4P16144 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
ITGB4P16144 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
ITGB4P16144 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC21.17■□□□□ 0.98
ITGB4P16144 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
ITGB4P16144 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC21.17■□□□□ 0.98
ITGB4P16144 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC21.17■□□□□ 0.98
ITGB4P16144 PTK7-212ENST00000476760 902 ntTSL 2 BASIC21.17■□□□□ 0.98
ITGB4P16144 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC21.17■□□□□ 0.98
ITGB4P16144 NAA38-206ENST00000576384 424 ntTSL 2 BASIC21.17■□□□□ 0.98
ITGB4P16144 WFDC1-204ENST00000613603 549 ntBASIC21.17■□□□□ 0.98
ITGB4P16144 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
ITGB4P16144 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
ITGB4P16144 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ITGB4P16144 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ITGB4P16144 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ITGB4P16144 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
ITGB4P16144 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
ITGB4P16144 AC087499.6-201ENST00000411576 835 ntBASIC21.16■□□□□ 0.98
ITGB4P16144 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC21.16■□□□□ 0.98
ITGB4P16144 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
ITGB4P16144 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC21.16■□□□□ 0.98
ITGB4P16144 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC21.16■□□□□ 0.98
ITGB4P16144 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
ITGB4P16144 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ITGB4P16144 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ITGB4P16144 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
ITGB4P16144 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
ITGB4P16144 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ITGB4P16144 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
ITGB4P16144 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC21.16■□□□□ 0.98
ITGB4P16144 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
ITGB4P16144 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ITGB4P16144 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC21.16■□□□□ 0.98
ITGB4P16144 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
ITGB4P16144 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
ITGB4P16144 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
ITGB4P16144 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ITGB4P16144 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
ITGB4P16144 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
ITGB4P16144 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC21.15■□□□□ 0.98
ITGB4P16144 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
ITGB4P16144 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
ITGB4P16144 KRT223P-202ENST00000449164 1292 ntBASIC21.15■□□□□ 0.98
ITGB4P16144 FUZ-207ENST00000526575 482 ntTSL 4 BASIC21.15■□□□□ 0.98
ITGB4P16144 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
ITGB4P16144 TEX48-202ENST00000612244 662 ntTSL 3 BASIC21.15■□□□□ 0.98
ITGB4P16144 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC21.15■□□□□ 0.98
ITGB4P16144 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
ITGB4P16144 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
ITGB4P16144 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
ITGB4P16144 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC21.15■□□□□ 0.98
ITGB4P16144 GPAA1P2-202ENST00000606848 1787 ntBASIC21.15■□□□□ 0.98
ITGB4P16144 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
ITGB4P16144 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
ITGB4P16144 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC21.15■□□□□ 0.98
ITGB4P16144 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
ITGB4P16144 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
ITGB4P16144 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC21.15■□□□□ 0.98
ITGB4P16144 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
ITGB4P16144 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC21.15■□□□□ 0.98
ITGB4P16144 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
ITGB4P16144 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC21.15■□□□□ 0.98
ITGB4P16144 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC21.15■□□□□ 0.98
ITGB4P16144 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
ITGB4P16144 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms