Protein–RNA interactions for Protein: P13994

CCDC130, Coiled-coil domain-containing protein 130, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130P13994 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
CCDC130P13994 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC130P13994 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC130P13994 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC130P13994 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC130P13994 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
CCDC130P13994 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC17.79■□□□□ 0.44
CCDC130P13994 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
CCDC130P13994 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC17.78■□□□□ 0.44
CCDC130P13994 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC17.78■□□□□ 0.44
CCDC130P13994 AC106886.4-201ENST00000623557 2502 ntBASIC17.78■□□□□ 0.44
CCDC130P13994 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC17.78■□□□□ 0.44
CCDC130P13994 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC130P13994 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC130P13994 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC17.78■□□□□ 0.44
CCDC130P13994 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC130P13994 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC130P13994 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC130P13994 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC17.78■□□□□ 0.44
CCDC130P13994 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC130P13994 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC17.78■□□□□ 0.44
CCDC130P13994 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC17.78■□□□□ 0.44
CCDC130P13994 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC130P13994 CD82-202ENST00000342935 967 ntTSL 5 BASIC17.78■□□□□ 0.44
CCDC130P13994 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC17.78■□□□□ 0.44
CCDC130P13994 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC17.78■□□□□ 0.44
CCDC130P13994 AC140658.5-201ENST00000438532 169 ntBASIC17.78■□□□□ 0.44
CCDC130P13994 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC17.78■□□□□ 0.44
CCDC130P13994 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC17.78■□□□□ 0.44
CCDC130P13994 MTRF1LP2-201ENST00000506027 1122 ntBASIC17.78■□□□□ 0.44
CCDC130P13994 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC17.78■□□□□ 0.44
CCDC130P13994 DHDH-204ENST00000523250 634 ntTSL 5 BASIC17.78■□□□□ 0.44
CCDC130P13994 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
CCDC130P13994 MIR3687-2-201ENST00000577708 61 ntBASIC17.78■□□□□ 0.44
CCDC130P13994 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC17.78■□□□□ 0.44
CCDC130P13994 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC17.78■□□□□ 0.44
CCDC130P13994 AC013467.2-201ENST00000605472 835 ntBASIC17.78■□□□□ 0.44
CCDC130P13994 MIR3687-1-201ENST00000614492 61 ntBASIC17.78■□□□□ 0.44
CCDC130P13994 AC055717.3-201ENST00000622967 595 ntBASIC17.78■□□□□ 0.44
CCDC130P13994 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC130P13994 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC130P13994 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
CCDC130P13994 AC078925.2-201ENST00000624013 1973 ntBASIC17.78■□□□□ 0.44
CCDC130P13994 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC130P13994 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC130P13994 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC130P13994 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC130P13994 AD000864.1-201ENST00000624076 2295 ntBASIC17.78■□□□□ 0.44
CCDC130P13994 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC130P13994 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC130P13994 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC17.78■□□□□ 0.44
CCDC130P13994 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC130P13994 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC130P13994 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC17.77■□□□□ 0.44
CCDC130P13994 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC17.77■□□□□ 0.44
CCDC130P13994 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC17.77■□□□□ 0.44
CCDC130P13994 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
CCDC130P13994 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CCDC130P13994 AL603756.1-201ENST00000606511 2163 ntBASIC17.77■□□□□ 0.44
CCDC130P13994 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
CCDC130P13994 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CCDC130P13994 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
CCDC130P13994 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CCDC130P13994 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CCDC130P13994 SNX33P1-201ENST00000592116 1762 ntBASIC17.77■□□□□ 0.44
CCDC130P13994 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
CCDC130P13994 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CCDC130P13994 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CCDC130P13994 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
CCDC130P13994 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
CCDC130P13994 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CCDC130P13994 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
CCDC130P13994 RNU1-129P-201ENST00000384064 167 ntBASIC17.77■□□□□ 0.44
CCDC130P13994 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC17.77■□□□□ 0.44
CCDC130P13994 HTR5BP-201ENST00000430851 1154 ntBASIC17.77■□□□□ 0.44
CCDC130P13994 THTPA-204ENST00000554970 569 ntTSL 4 BASIC17.77■□□□□ 0.44
CCDC130P13994 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC17.77■□□□□ 0.44
CCDC130P13994 THTPA-206ENST00000556015 535 ntTSL 3 BASIC17.77■□□□□ 0.44
CCDC130P13994 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC17.77■□□□□ 0.44
CCDC130P13994 U1.21-201ENST00000580816 167 ntBASIC17.77■□□□□ 0.44
CCDC130P13994 AL031055.1-201ENST00000606362 631 ntBASIC17.77■□□□□ 0.44
CCDC130P13994 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC17.77■□□□□ 0.44
CCDC130P13994 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CCDC130P13994 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC17.77■□□□□ 0.44
CCDC130P13994 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CCDC130P13994 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CCDC130P13994 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
CCDC130P13994 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CCDC130P13994 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC17.77■□□□□ 0.43
CCDC130P13994 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.43
CCDC130P13994 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC17.77■□□□□ 0.43
CCDC130P13994 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CCDC130P13994 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CCDC130P13994 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC17.77■□□□□ 0.43
CCDC130P13994 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CCDC130P13994 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC17.77■□□□□ 0.43
CCDC130P13994 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
CCDC130P13994 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC130P13994 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC130P13994 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC17.76■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms