Protein–RNA interactions for Protein: P12830

CDH1, Cadherin-1, humanhuman

Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1P12830 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC16.44■□□□□ 0.22
CDH1P12830 KLK8-205ENST00000593490 267 ntTSL 3 BASIC16.44■□□□□ 0.22
CDH1P12830 PRKN-208ENST00000610470 531 ntTSL 2 BASIC16.44■□□□□ 0.22
CDH1P12830 PRKN-209ENST00000612485 225 ntTSL 5 BASIC16.44■□□□□ 0.22
CDH1P12830 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC16.44■□□□□ 0.22
CDH1P12830 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC16.44■□□□□ 0.22
CDH1P12830 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
CDH1P12830 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC16.44■□□□□ 0.22
CDH1P12830 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC16.44■□□□□ 0.22
CDH1P12830 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC16.44■□□□□ 0.22
CDH1P12830 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC16.44■□□□□ 0.22
CDH1P12830 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CDH1P12830 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC16.44■□□□□ 0.22
CDH1P12830 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
CDH1P12830 AC068418.2-201ENST00000577309 3703 ntBASIC16.44■□□□□ 0.22
CDH1P12830 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
CDH1P12830 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CDH1P12830 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC16.43■□□□□ 0.22
CDH1P12830 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CDH1P12830 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CDH1P12830 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC16.43■□□□□ 0.22
CDH1P12830 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC16.43■□□□□ 0.22
CDH1P12830 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CDH1P12830 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CDH1P12830 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC16.43■□□□□ 0.22
CDH1P12830 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CDH1P12830 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC16.43■□□□□ 0.22
CDH1P12830 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CDH1P12830 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
CDH1P12830 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC16.43■□□□□ 0.22
CDH1P12830 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC16.43■□□□□ 0.22
CDH1P12830 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CDH1P12830 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC16.43■□□□□ 0.22
CDH1P12830 PAWRP1-201ENST00000451083 565 ntBASIC16.43■□□□□ 0.22
CDH1P12830 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC16.43■□□□□ 0.22
CDH1P12830 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC16.43■□□□□ 0.22
CDH1P12830 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC16.43■□□□□ 0.22
CDH1P12830 AC005593.1-201ENST00000624894 515 ntBASIC16.43■□□□□ 0.22
CDH1P12830 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CDH1P12830 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CDH1P12830 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC16.43■□□□□ 0.22
CDH1P12830 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
CDH1P12830 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
CDH1P12830 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CDH1P12830 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CDH1P12830 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CDH1P12830 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC16.43■□□□□ 0.22
CDH1P12830 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
CDH1P12830 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CDH1P12830 HLA-A-201ENST00000376802 1334 ntBASIC16.43■□□□□ 0.22
CDH1P12830 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
CDH1P12830 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
CDH1P12830 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC16.43■□□□□ 0.22
CDH1P12830 WT1-209ENST00000530998 2421 ntTSL 2 BASIC16.43■□□□□ 0.22
CDH1P12830 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CDH1P12830 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CDH1P12830 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CDH1P12830 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC16.42■□□□□ 0.22
CDH1P12830 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC16.42■□□□□ 0.22
CDH1P12830 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CDH1P12830 AC026691.1-201ENST00000602502 2017 ntBASIC16.42■□□□□ 0.22
CDH1P12830 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC16.42■□□□□ 0.22
CDH1P12830 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
CDH1P12830 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC16.42■□□□□ 0.22
CDH1P12830 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CDH1P12830 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
CDH1P12830 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CDH1P12830 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CDH1P12830 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC16.42■□□□□ 0.22
CDH1P12830 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC16.42■□□□□ 0.22
CDH1P12830 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC16.42■□□□□ 0.22
CDH1P12830 DUX4L17-201ENST00000557360 1267 ntBASIC16.42■□□□□ 0.22
CDH1P12830 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CDH1P12830 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
CDH1P12830 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC16.42■□□□□ 0.22
CDH1P12830 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC16.42■□□□□ 0.22
CDH1P12830 AC117500.6-201ENST00000624871 588 ntBASIC16.42■□□□□ 0.22
CDH1P12830 ABBA01031661.1-201ENST00000634362 1253 ntBASIC16.42■□□□□ 0.22
CDH1P12830 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CDH1P12830 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC16.42■□□□□ 0.22
CDH1P12830 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC16.42■□□□□ 0.22
CDH1P12830 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC16.42■□□□□ 0.22
CDH1P12830 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC16.42■□□□□ 0.22
CDH1P12830 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CDH1P12830 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
CDH1P12830 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC16.42■□□□□ 0.22
CDH1P12830 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC16.42■□□□□ 0.22
CDH1P12830 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CDH1P12830 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
CDH1P12830 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CDH1P12830 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
CDH1P12830 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CDH1P12830 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CDH1P12830 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CDH1P12830 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CDH1P12830 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC16.41■□□□□ 0.22
CDH1P12830 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CDH1P12830 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC16.41■□□□□ 0.22
CDH1P12830 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CDH1P12830 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 76.6 ms