Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 DAP-202ENST00000432074 1048 ntTSL 2 BASIC15.93■□□□□ 0.14
MT-ND1P03886 RN7SL606P-201ENST00000472779 293 ntBASIC15.93■□□□□ 0.14
MT-ND1P03886 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC15.93■□□□□ 0.14
MT-ND1P03886 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
MT-ND1P03886 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC15.93■□□□□ 0.14
MT-ND1P03886 STK25P1-201ENST00000585406 838 ntBASIC15.93■□□□□ 0.14
MT-ND1P03886 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC15.93■□□□□ 0.14
MT-ND1P03886 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
MT-ND1P03886 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
MT-ND1P03886 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC15.93■□□□□ 0.14
MT-ND1P03886 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC15.93■□□□□ 0.14
MT-ND1P03886 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC15.93■□□□□ 0.14
MT-ND1P03886 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
MT-ND1P03886 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC15.93■□□□□ 0.14
MT-ND1P03886 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
MT-ND1P03886 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
MT-ND1P03886 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC15.93■□□□□ 0.14
MT-ND1P03886 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
MT-ND1P03886 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
MT-ND1P03886 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
MT-ND1P03886 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC15.92■□□□□ 0.14
MT-ND1P03886 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
MT-ND1P03886 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
MT-ND1P03886 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
MT-ND1P03886 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC15.92■□□□□ 0.14
MT-ND1P03886 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC15.92■□□□□ 0.14
MT-ND1P03886 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
MT-ND1P03886 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
MT-ND1P03886 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC15.92■□□□□ 0.14
MT-ND1P03886 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
MT-ND1P03886 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
MT-ND1P03886 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
MT-ND1P03886 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
MT-ND1P03886 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
MT-ND1P03886 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC15.92■□□□□ 0.14
MT-ND1P03886 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
MT-ND1P03886 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
MT-ND1P03886 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC15.92■□□□□ 0.14
MT-ND1P03886 AC111152.3-201ENST00000569699 673 ntBASIC15.92■□□□□ 0.14
MT-ND1P03886 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
MT-ND1P03886 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC15.92■□□□□ 0.14
MT-ND1P03886 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
MT-ND1P03886 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
MT-ND1P03886 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
MT-ND1P03886 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC15.92■□□□□ 0.14
MT-ND1P03886 FUT8-AS1-201ENST00000621019 1521 ntBASIC15.92■□□□□ 0.14
MT-ND1P03886 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
MT-ND1P03886 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC15.92■□□□□ 0.14
MT-ND1P03886 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
MT-ND1P03886 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
MT-ND1P03886 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC15.92■□□□□ 0.14
MT-ND1P03886 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
MT-ND1P03886 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC15.92■□□□□ 0.14
MT-ND1P03886 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
MT-ND1P03886 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
MT-ND1P03886 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
MT-ND1P03886 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
MT-ND1P03886 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC15.91■□□□□ 0.14
MT-ND1P03886 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
MT-ND1P03886 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
MT-ND1P03886 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
MT-ND1P03886 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
MT-ND1P03886 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
MT-ND1P03886 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC15.91■□□□□ 0.14
MT-ND1P03886 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
MT-ND1P03886 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
MT-ND1P03886 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC15.91■□□□□ 0.14
MT-ND1P03886 AC010491.1-201ENST00000563101 2797 ntBASIC15.91■□□□□ 0.14
MT-ND1P03886 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
MT-ND1P03886 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
MT-ND1P03886 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
MT-ND1P03886 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC15.91■□□□□ 0.14
MT-ND1P03886 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC15.91■□□□□ 0.14
MT-ND1P03886 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
MT-ND1P03886 AC090616.6-201ENST00000582640 721 ntBASIC15.91■□□□□ 0.14
MT-ND1P03886 AL353801.3-201ENST00000609898 542 ntBASIC15.91■□□□□ 0.14
MT-ND1P03886 AL592071.1-201ENST00000611956 408 ntBASIC15.91■□□□□ 0.14
MT-ND1P03886 AC124864.1-201ENST00000623408 392 ntBASIC15.91■□□□□ 0.14
MT-ND1P03886 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC15.91■□□□□ 0.14
MT-ND1P03886 VPS72-207ENST00000640458 689 ntTSL 5 BASIC15.91■□□□□ 0.14
MT-ND1P03886 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
MT-ND1P03886 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
MT-ND1P03886 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
MT-ND1P03886 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
MT-ND1P03886 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
MT-ND1P03886 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
MT-ND1P03886 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
MT-ND1P03886 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
MT-ND1P03886 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
MT-ND1P03886 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
MT-ND1P03886 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
MT-ND1P03886 ME2P1-201ENST00000426028 1970 ntBASIC15.91■□□□□ 0.14
MT-ND1P03886 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
MT-ND1P03886 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
MT-ND1P03886 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
MT-ND1P03886 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
MT-ND1P03886 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
MT-ND1P03886 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC15.9■□□□□ 0.14
MT-ND1P03886 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC15.9■□□□□ 0.14
MT-ND1P03886 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms