Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CHRNA1P02708 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CHRNA1P02708 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CHRNA1P02708 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CHRNA1P02708 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC18.16■□□□□ 0.5
CHRNA1P02708 PCDHB17P-201ENST00000539533 2393 ntBASIC18.16■□□□□ 0.5
CHRNA1P02708 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC18.16■□□□□ 0.5
CHRNA1P02708 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CHRNA1P02708 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC18.15■□□□□ 0.5
CHRNA1P02708 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC18.15■□□□□ 0.5
CHRNA1P02708 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
CHRNA1P02708 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CHRNA1P02708 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC18.15■□□□□ 0.5
CHRNA1P02708 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CHRNA1P02708 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CHRNA1P02708 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CHRNA1P02708 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CHRNA1P02708 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC18.15■□□□□ 0.5
CHRNA1P02708 FAM220BP-201ENST00000377689 816 ntBASIC18.15■□□□□ 0.5
CHRNA1P02708 HNRNPA3P1-201ENST00000401429 1139 ntBASIC18.15■□□□□ 0.5
CHRNA1P02708 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
CHRNA1P02708 HNRNPA3P5-201ENST00000455201 833 ntBASIC18.15■□□□□ 0.5
CHRNA1P02708 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC18.15■□□□□ 0.5
CHRNA1P02708 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC18.15■□□□□ 0.5
CHRNA1P02708 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC18.15■□□□□ 0.5
CHRNA1P02708 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC18.15■□□□□ 0.5
CHRNA1P02708 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC18.15■□□□□ 0.5
CHRNA1P02708 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC18.15■□□□□ 0.5
CHRNA1P02708 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CHRNA1P02708 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CHRNA1P02708 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
CHRNA1P02708 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CHRNA1P02708 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC18.15■□□□□ 0.5
CHRNA1P02708 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC18.15■□□□□ 0.5
CHRNA1P02708 KRT8P39-201ENST00000396270 1433 ntBASIC18.15■□□□□ 0.5
CHRNA1P02708 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC18.15■□□□□ 0.5
CHRNA1P02708 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC18.14■□□□□ 0.5
CHRNA1P02708 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.5
CHRNA1P02708 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CHRNA1P02708 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
CHRNA1P02708 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CHRNA1P02708 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC18.14■□□□□ 0.49
CHRNA1P02708 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC18.14■□□□□ 0.49
CHRNA1P02708 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
CHRNA1P02708 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC18.14■□□□□ 0.49
CHRNA1P02708 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CHRNA1P02708 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC18.14■□□□□ 0.49
CHRNA1P02708 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC18.14■□□□□ 0.49
CHRNA1P02708 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC18.14■□□□□ 0.49
CHRNA1P02708 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC18.14■□□□□ 0.49
CHRNA1P02708 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CHRNA1P02708 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC18.14■□□□□ 0.49
CHRNA1P02708 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CHRNA1P02708 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC18.14■□□□□ 0.49
CHRNA1P02708 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC18.14■□□□□ 0.49
CHRNA1P02708 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
CHRNA1P02708 AL133373.2-201ENST00000623187 2828 ntBASIC18.14■□□□□ 0.49
CHRNA1P02708 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
CHRNA1P02708 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CHRNA1P02708 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC18.14■□□□□ 0.49
CHRNA1P02708 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC18.14■□□□□ 0.49
CHRNA1P02708 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
CHRNA1P02708 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CHRNA1P02708 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC18.14■□□□□ 0.49
CHRNA1P02708 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC18.13■□□□□ 0.49
CHRNA1P02708 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC18.13■□□□□ 0.49
CHRNA1P02708 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CHRNA1P02708 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC18.13■□□□□ 0.49
CHRNA1P02708 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC18.13■□□□□ 0.49
CHRNA1P02708 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC18.13■□□□□ 0.49
CHRNA1P02708 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC18.13■□□□□ 0.49
CHRNA1P02708 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CHRNA1P02708 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CHRNA1P02708 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CHRNA1P02708 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CHRNA1P02708 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CHRNA1P02708 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CHRNA1P02708 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CHRNA1P02708 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CHRNA1P02708 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CHRNA1P02708 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CHRNA1P02708 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CHRNA1P02708 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CHRNA1P02708 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CHRNA1P02708 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC18.13■□□□□ 0.49
CHRNA1P02708 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC18.13■□□□□ 0.49
CHRNA1P02708 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CHRNA1P02708 AC244107.1-201ENST00000442033 332 ntBASIC18.13■□□□□ 0.49
CHRNA1P02708 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CHRNA1P02708 GAPDHP21-201ENST00000450301 1010 ntBASIC18.13■□□□□ 0.49
CHRNA1P02708 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CHRNA1P02708 AC098859.1-201ENST00000502915 1238 ntBASIC18.13■□□□□ 0.49
CHRNA1P02708 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC18.13■□□□□ 0.49
CHRNA1P02708 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC18.13■□□□□ 0.49
CHRNA1P02708 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CHRNA1P02708 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CHRNA1P02708 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CHRNA1P02708 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
CHRNA1P02708 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
CHRNA1P02708 GOLGA2P9-201ENST00000596977 1937 ntBASIC18.13■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms