Protein–RNA interactions for Protein: P02656

APOC3, Apolipoprotein C-III, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC3P02656 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
APOC3P02656 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
APOC3P02656 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC13.52□□□□□ -0.25
APOC3P02656 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC13.52□□□□□ -0.25
APOC3P02656 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
APOC3P02656 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.25
APOC3P02656 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
APOC3P02656 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC13.52□□□□□ -0.25
APOC3P02656 PNN-205ENST00000556530 601 ntTSL 2 BASIC13.52□□□□□ -0.25
APOC3P02656 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC13.52□□□□□ -0.25
APOC3P02656 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC13.52□□□□□ -0.25
APOC3P02656 AC005181.1-201ENST00000604782 1256 ntBASIC13.52□□□□□ -0.25
APOC3P02656 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC13.52□□□□□ -0.25
APOC3P02656 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
APOC3P02656 AC013268.1-206ENST00000638368 961 ntBASIC13.52□□□□□ -0.25
APOC3P02656 AC112229.1-201ENST00000639295 961 ntBASIC13.52□□□□□ -0.25
APOC3P02656 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
APOC3P02656 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
APOC3P02656 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC13.52□□□□□ -0.25
APOC3P02656 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
APOC3P02656 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC13.52□□□□□ -0.25
APOC3P02656 ABR-205ENST00000544583 5595 ntTSL 2 BASIC13.52□□□□□ -0.25
APOC3P02656 OS9-207ENST00000439210 1946 ntTSL 2 BASIC13.52□□□□□ -0.25
APOC3P02656 REXO1L2P-201ENST00000425429 2069 ntBASIC13.52□□□□□ -0.25
APOC3P02656 USP31-203ENST00000567975 2142 ntTSL 2 BASIC13.52□□□□□ -0.25
APOC3P02656 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
APOC3P02656 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
APOC3P02656 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC13.52□□□□□ -0.25
APOC3P02656 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
APOC3P02656 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
APOC3P02656 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
APOC3P02656 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
APOC3P02656 FAM219A-203ENST00000379080 3591 ntTSL 2 BASIC13.51□□□□□ -0.25
APOC3P02656 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
APOC3P02656 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
APOC3P02656 ZNF202-206ENST00000529691 3384 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
APOC3P02656 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
APOC3P02656 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC13.51□□□□□ -0.25
APOC3P02656 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
APOC3P02656 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
APOC3P02656 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
APOC3P02656 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
APOC3P02656 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC13.51□□□□□ -0.25
APOC3P02656 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
APOC3P02656 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
APOC3P02656 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
APOC3P02656 SP100-205ENST00000409824 1802 ntTSL 5 BASIC13.51□□□□□ -0.25
APOC3P02656 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
APOC3P02656 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
APOC3P02656 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC13.51□□□□□ -0.25
APOC3P02656 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
APOC3P02656 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
APOC3P02656 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC13.51□□□□□ -0.25
APOC3P02656 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
APOC3P02656 PARP1-202ENST00000366792 553 ntTSL 3 BASIC13.51□□□□□ -0.25
APOC3P02656 EBPL-204ENST00000378272 766 ntTSL 3 BASIC13.51□□□□□ -0.25
APOC3P02656 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
APOC3P02656 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
APOC3P02656 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC13.51□□□□□ -0.25
APOC3P02656 PRSS44-201ENST00000515154 1146 ntBASIC13.51□□□□□ -0.25
APOC3P02656 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC13.51□□□□□ -0.25
APOC3P02656 GALNS-213ENST00000569433 723 ntTSL 3 BASIC13.51□□□□□ -0.25
APOC3P02656 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC13.51□□□□□ -0.25
APOC3P02656 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
APOC3P02656 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
APOC3P02656 AC012354.3-201ENST00000623734 483 ntBASIC13.51□□□□□ -0.25
APOC3P02656 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
APOC3P02656 CICP8-201ENST00000455800 2813 ntBASIC13.51□□□□□ -0.25
APOC3P02656 SIPA1L3-201ENST00000222345 7987 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
APOC3P02656 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
APOC3P02656 MARS-233ENST00000628866 2583 ntTSL 5 BASIC13.51□□□□□ -0.25
APOC3P02656 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
APOC3P02656 POR-201ENST00000394893 2532 ntTSL 5 BASIC13.51□□□□□ -0.25
APOC3P02656 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC13.51□□□□□ -0.25
APOC3P02656 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
APOC3P02656 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
APOC3P02656 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
APOC3P02656 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
APOC3P02656 OFD1-204ENST00000398395 3307 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
APOC3P02656 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
APOC3P02656 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC13.51□□□□□ -0.25
APOC3P02656 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
APOC3P02656 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC13.51□□□□□ -0.25
APOC3P02656 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
APOC3P02656 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC13.5□□□□□ -0.25
APOC3P02656 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
APOC3P02656 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
APOC3P02656 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
APOC3P02656 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC13.5□□□□□ -0.25
APOC3P02656 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
APOC3P02656 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
APOC3P02656 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
APOC3P02656 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC13.5□□□□□ -0.25
APOC3P02656 USP28-214ENST00000545540 3431 ntTSL 2 BASIC13.5□□□□□ -0.25
APOC3P02656 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
APOC3P02656 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
APOC3P02656 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
APOC3P02656 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
APOC3P02656 SELENON-202ENST00000361547 4334 ntAPPRIS P4 TSL 1 (best) BASIC13.5□□□□□ -0.25
APOC3P02656 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC13.5□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 11.3 ms