Protein–RNA interactions for Protein: P01891

HLA-A, HLA class I histocompatibility antigen, A-68 alpha chain, humanhuman

Known RBP Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-AP01891 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
HLA-AP01891 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
HLA-AP01891 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
HLA-AP01891 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC14.27□□□□□ -0.13
HLA-AP01891 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
HLA-AP01891 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
HLA-AP01891 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
HLA-AP01891 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC14.26□□□□□ -0.13
HLA-AP01891 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HLA-AP01891 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HLA-AP01891 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
HLA-AP01891 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
HLA-AP01891 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
HLA-AP01891 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
HLA-AP01891 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HLA-AP01891 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
HLA-AP01891 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HLA-AP01891 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HLA-AP01891 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC14.26□□□□□ -0.13
HLA-AP01891 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC14.26□□□□□ -0.13
HLA-AP01891 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HLA-AP01891 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
HLA-AP01891 MIR600HG-201ENST00000449175 5984 ntBASIC14.26□□□□□ -0.13
HLA-AP01891 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HLA-AP01891 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC14.26□□□□□ -0.13
HLA-AP01891 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HLA-AP01891 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
HLA-AP01891 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HLA-AP01891 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HLA-AP01891 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
HLA-AP01891 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HLA-AP01891 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC14.26□□□□□ -0.13
HLA-AP01891 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HLA-AP01891 CNP-204ENST00000472031 1019 ntTSL 2 BASIC14.26□□□□□ -0.13
HLA-AP01891 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
HLA-AP01891 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC14.26□□□□□ -0.13
HLA-AP01891 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC14.26□□□□□ -0.13
HLA-AP01891 USF2-205ENST00000594064 1179 ntTSL 2 BASIC14.26□□□□□ -0.13
HLA-AP01891 AL023973.1-201ENST00000624619 620 ntBASIC14.26□□□□□ -0.13
HLA-AP01891 AL157888.1-201ENST00000631930 593 ntBASIC14.26□□□□□ -0.13
HLA-AP01891 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
HLA-AP01891 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
HLA-AP01891 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HLA-AP01891 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
HLA-AP01891 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC14.26□□□□□ -0.13
HLA-AP01891 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC14.26□□□□□ -0.13
HLA-AP01891 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HLA-AP01891 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC14.26□□□□□ -0.13
HLA-AP01891 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HLA-AP01891 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HLA-AP01891 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
HLA-AP01891 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
HLA-AP01891 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC14.26□□□□□ -0.13
HLA-AP01891 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC14.26□□□□□ -0.13
HLA-AP01891 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC14.26□□□□□ -0.13
HLA-AP01891 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC14.26□□□□□ -0.13
HLA-AP01891 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
HLA-AP01891 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
HLA-AP01891 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
HLA-AP01891 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC14.26□□□□□ -0.13
HLA-AP01891 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HLA-AP01891 FRMD8P1-201ENST00000440433 1524 ntBASIC14.25□□□□□ -0.13
HLA-AP01891 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
HLA-AP01891 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC14.25□□□□□ -0.13
HLA-AP01891 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC14.25□□□□□ -0.13
HLA-AP01891 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HLA-AP01891 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
HLA-AP01891 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
HLA-AP01891 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC14.25□□□□□ -0.13
HLA-AP01891 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
HLA-AP01891 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC14.25□□□□□ -0.13
HLA-AP01891 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HLA-AP01891 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
HLA-AP01891 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
HLA-AP01891 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
HLA-AP01891 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
HLA-AP01891 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC14.25□□□□□ -0.13
HLA-AP01891 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC14.25□□□□□ -0.13
HLA-AP01891 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HLA-AP01891 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
HLA-AP01891 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
HLA-AP01891 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
HLA-AP01891 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC14.25□□□□□ -0.13
HLA-AP01891 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
HLA-AP01891 PPOX-219ENST00000544598 813 ntTSL 2 BASIC14.25□□□□□ -0.13
HLA-AP01891 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC14.25□□□□□ -0.13
HLA-AP01891 TK2-213ENST00000563369 882 ntTSL 5 BASIC14.25□□□□□ -0.13
HLA-AP01891 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC14.25□□□□□ -0.13
HLA-AP01891 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC14.25□□□□□ -0.13
HLA-AP01891 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC14.25□□□□□ -0.13
HLA-AP01891 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC14.25□□□□□ -0.13
HLA-AP01891 AL138966.2-201ENST00000621997 464 ntBASIC14.25□□□□□ -0.13
HLA-AP01891 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
HLA-AP01891 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
HLA-AP01891 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
HLA-AP01891 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HLA-AP01891 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC14.25□□□□□ -0.13
HLA-AP01891 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
HLA-AP01891 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
HLA-AP01891 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 55.7 ms