Protein–RNA interactions for Protein: P01733

TRBV12-3, T-cell receptor beta chain V region YT35, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV12-3P01733 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
TRBV12-3P01733 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC13.01□□□□□ -0.33
TRBV12-3P01733 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TRBV12-3P01733 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
TRBV12-3P01733 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
TRBV12-3P01733 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC13.01□□□□□ -0.33
TRBV12-3P01733 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC13.01□□□□□ -0.33
TRBV12-3P01733 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
TRBV12-3P01733 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC13□□□□□ -0.33
TRBV12-3P01733 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TRBV12-3P01733 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC13□□□□□ -0.33
TRBV12-3P01733 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
TRBV12-3P01733 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
TRBV12-3P01733 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TRBV12-3P01733 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TRBV12-3P01733 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC13□□□□□ -0.33
TRBV12-3P01733 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
TRBV12-3P01733 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC13□□□□□ -0.33
TRBV12-3P01733 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
TRBV12-3P01733 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
TRBV12-3P01733 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC13□□□□□ -0.33
TRBV12-3P01733 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC13□□□□□ -0.33
TRBV12-3P01733 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
TRBV12-3P01733 AL353732.1-201ENST00000569618 1459 ntBASIC13□□□□□ -0.33
TRBV12-3P01733 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC13□□□□□ -0.33
TRBV12-3P01733 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
TRBV12-3P01733 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
TRBV12-3P01733 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
TRBV12-3P01733 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC13□□□□□ -0.33
TRBV12-3P01733 BCAR1-209ENST00000546196 1340 ntBASIC13□□□□□ -0.33
TRBV12-3P01733 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TRBV12-3P01733 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TRBV12-3P01733 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
TRBV12-3P01733 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
TRBV12-3P01733 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC13□□□□□ -0.33
TRBV12-3P01733 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC13□□□□□ -0.33
TRBV12-3P01733 AL591424.1-201ENST00000442569 1213 ntBASIC13□□□□□ -0.33
TRBV12-3P01733 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC13□□□□□ -0.33
TRBV12-3P01733 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC13□□□□□ -0.33
TRBV12-3P01733 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC13□□□□□ -0.33
TRBV12-3P01733 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC13□□□□□ -0.33
TRBV12-3P01733 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TRBV12-3P01733 AC005412.3-201ENST00000580309 715 ntBASIC13□□□□□ -0.33
TRBV12-3P01733 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
TRBV12-3P01733 AL513190.1-201ENST00000621254 727 ntBASIC13□□□□□ -0.33
TRBV12-3P01733 AC004877.2-201ENST00000623941 599 ntBASIC13□□□□□ -0.33
TRBV12-3P01733 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
TRBV12-3P01733 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
TRBV12-3P01733 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TRBV12-3P01733 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC13□□□□□ -0.33
TRBV12-3P01733 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TRBV12-3P01733 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC13□□□□□ -0.33
TRBV12-3P01733 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC13□□□□□ -0.33
TRBV12-3P01733 AL671710.1-201ENST00000610245 2349 ntBASIC13□□□□□ -0.33
TRBV12-3P01733 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
TRBV12-3P01733 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TRBV12-3P01733 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TRBV12-3P01733 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC13□□□□□ -0.33
TRBV12-3P01733 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
TRBV12-3P01733 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
TRBV12-3P01733 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC13□□□□□ -0.33
TRBV12-3P01733 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC13□□□□□ -0.33
TRBV12-3P01733 CES3-203ENST00000543856 3178 ntTSL 2 BASIC13□□□□□ -0.33
TRBV12-3P01733 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
TRBV12-3P01733 HARS-203ENST00000431330 1774 ntTSL 2 BASIC12.99□□□□□ -0.33
TRBV12-3P01733 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
TRBV12-3P01733 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TRBV12-3P01733 AC006277.1-201ENST00000624348 1610 ntBASIC12.99□□□□□ -0.33
TRBV12-3P01733 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
TRBV12-3P01733 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC12.99□□□□□ -0.33
TRBV12-3P01733 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TRBV12-3P01733 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
TRBV12-3P01733 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TRBV12-3P01733 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TRBV12-3P01733 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TRBV12-3P01733 AC025580.3-201ENST00000617932 1424 ntBASIC12.99□□□□□ -0.33
TRBV12-3P01733 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TRBV12-3P01733 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
TRBV12-3P01733 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
TRBV12-3P01733 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
TRBV12-3P01733 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
TRBV12-3P01733 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC12.99□□□□□ -0.33
TRBV12-3P01733 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
TRBV12-3P01733 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC12.99□□□□□ -0.33
TRBV12-3P01733 AC023274.1-201ENST00000418278 595 ntBASIC12.99□□□□□ -0.33
TRBV12-3P01733 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
TRBV12-3P01733 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
TRBV12-3P01733 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC12.99□□□□□ -0.33
TRBV12-3P01733 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
TRBV12-3P01733 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC12.99□□□□□ -0.33
TRBV12-3P01733 AC091167.2-201ENST00000579581 588 ntBASIC12.99□□□□□ -0.33
TRBV12-3P01733 MIR4492-201ENST00000581627 80 ntBASIC12.99□□□□□ -0.33
TRBV12-3P01733 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC12.99□□□□□ -0.33
TRBV12-3P01733 AQP6-205ENST00000618286 829 ntTSL 5 BASIC12.99□□□□□ -0.33
TRBV12-3P01733 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC12.99□□□□□ -0.33
TRBV12-3P01733 AC092865.6-201ENST00000642101 219 ntBASIC12.99□□□□□ -0.33
TRBV12-3P01733 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
TRBV12-3P01733 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
TRBV12-3P01733 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC12.99□□□□□ -0.33
TRBV12-3P01733 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 57.3 ms