Protein–RNA interactions for Protein: O95985

TOP3B, DNA topoisomerase 3-beta-1, humanhuman

Known RBP Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3BO95985 AC109462.3-201ENST00000573934 613 ntBASIC17.27■□□□□ 0.36
TOP3BO95985 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC17.27■□□□□ 0.36
TOP3BO95985 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC17.27■□□□□ 0.36
TOP3BO95985 PRR29-209ENST00000582540 967 ntTSL 2 BASIC17.27■□□□□ 0.36
TOP3BO95985 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC17.27■□□□□ 0.36
TOP3BO95985 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC17.27■□□□□ 0.36
TOP3BO95985 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC17.27■□□□□ 0.36
TOP3BO95985 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC17.27■□□□□ 0.36
TOP3BO95985 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TOP3BO95985 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
TOP3BO95985 DOC2GP-204ENST00000639052 2548 ntBASIC17.27■□□□□ 0.36
TOP3BO95985 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC17.27■□□□□ 0.36
TOP3BO95985 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
TOP3BO95985 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC17.27■□□□□ 0.35
TOP3BO95985 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC17.27■□□□□ 0.35
TOP3BO95985 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
TOP3BO95985 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC17.27■□□□□ 0.35
TOP3BO95985 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC17.27■□□□□ 0.35
TOP3BO95985 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
TOP3BO95985 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
TOP3BO95985 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
TOP3BO95985 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC17.26■□□□□ 0.35
TOP3BO95985 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
TOP3BO95985 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TOP3BO95985 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC17.26■□□□□ 0.35
TOP3BO95985 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
TOP3BO95985 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
TOP3BO95985 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
TOP3BO95985 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC17.26■□□□□ 0.35
TOP3BO95985 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TOP3BO95985 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
TOP3BO95985 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
TOP3BO95985 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TOP3BO95985 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TOP3BO95985 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TOP3BO95985 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TOP3BO95985 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC17.26■□□□□ 0.35
TOP3BO95985 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TOP3BO95985 CEND1P1-201ENST00000451006 455 ntBASIC17.26■□□□□ 0.35
TOP3BO95985 PON3-205ENST00000451904 1053 ntTSL 3 BASIC17.26■□□□□ 0.35
TOP3BO95985 MSRA-206ENST00000521209 814 ntTSL 3 BASIC17.26■□□□□ 0.35
TOP3BO95985 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
TOP3BO95985 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC17.26■□□□□ 0.35
TOP3BO95985 AC093512.1-201ENST00000617969 520 ntBASIC17.26■□□□□ 0.35
TOP3BO95985 AL513190.1-201ENST00000621254 727 ntBASIC17.26■□□□□ 0.35
TOP3BO95985 C20orf181-201ENST00000623918 480 ntBASIC17.26■□□□□ 0.35
TOP3BO95985 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
TOP3BO95985 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
TOP3BO95985 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
TOP3BO95985 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
TOP3BO95985 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TOP3BO95985 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
TOP3BO95985 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC17.26■□□□□ 0.35
TOP3BO95985 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TOP3BO95985 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
TOP3BO95985 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TOP3BO95985 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
TOP3BO95985 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC17.26■□□□□ 0.35
TOP3BO95985 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC17.26■□□□□ 0.35
TOP3BO95985 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
TOP3BO95985 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TOP3BO95985 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
TOP3BO95985 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TOP3BO95985 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
TOP3BO95985 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC17.25■□□□□ 0.35
TOP3BO95985 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC17.25■□□□□ 0.35
TOP3BO95985 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TOP3BO95985 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
TOP3BO95985 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TOP3BO95985 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
TOP3BO95985 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC17.25■□□□□ 0.35
TOP3BO95985 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC17.25■□□□□ 0.35
TOP3BO95985 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC17.25■□□□□ 0.35
TOP3BO95985 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
TOP3BO95985 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
TOP3BO95985 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TOP3BO95985 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC17.25■□□□□ 0.35
TOP3BO95985 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TOP3BO95985 AL139400.1-201ENST00000366220 510 ntBASIC17.25■□□□□ 0.35
TOP3BO95985 CD99-202ENST00000381180 530 ntTSL 2 BASIC17.25■□□□□ 0.35
TOP3BO95985 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TOP3BO95985 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TOP3BO95985 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC17.25■□□□□ 0.35
TOP3BO95985 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
TOP3BO95985 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC17.25■□□□□ 0.35
TOP3BO95985 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
TOP3BO95985 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
TOP3BO95985 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TOP3BO95985 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TOP3BO95985 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TOP3BO95985 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TOP3BO95985 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC17.25■□□□□ 0.35
TOP3BO95985 AL139384.1-201ENST00000612143 3047 ntBASIC17.25■□□□□ 0.35
TOP3BO95985 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TOP3BO95985 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
TOP3BO95985 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
TOP3BO95985 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TOP3BO95985 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
TOP3BO95985 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC17.25■□□□□ 0.35
TOP3BO95985 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms