Protein–RNA interactions for Protein: O95197

RTN3, Reticulon-3, humanhuman

Predicted RBP Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3O95197 PP12613-201ENST00000424958 2230 ntBASIC17.74■□□□□ 0.43
RTN3O95197 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RTN3O95197 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC17.73■□□□□ 0.43
RTN3O95197 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
RTN3O95197 TUBB8P12-201ENST00000308911 1335 ntBASIC17.73■□□□□ 0.43
RTN3O95197 TUBB7P-202ENST00000428444 1305 ntBASIC17.73■□□□□ 0.43
RTN3O95197 TUBB8P7-204ENST00000567960 1332 ntBASIC17.73■□□□□ 0.43
RTN3O95197 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RTN3O95197 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
RTN3O95197 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC17.73■□□□□ 0.43
RTN3O95197 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC17.73■□□□□ 0.43
RTN3O95197 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC17.73■□□□□ 0.43
RTN3O95197 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RTN3O95197 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RTN3O95197 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RTN3O95197 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RTN3O95197 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RTN3O95197 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
RTN3O95197 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC17.73■□□□□ 0.43
RTN3O95197 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC17.73■□□□□ 0.43
RTN3O95197 THTPA-204ENST00000554970 569 ntTSL 4 BASIC17.73■□□□□ 0.43
RTN3O95197 THTPA-206ENST00000556015 535 ntTSL 3 BASIC17.73■□□□□ 0.43
RTN3O95197 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
RTN3O95197 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC17.73■□□□□ 0.43
RTN3O95197 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RTN3O95197 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
RTN3O95197 NF2-208ENST00000403435 2568 ntTSL 5 BASIC17.73■□□□□ 0.43
RTN3O95197 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RTN3O95197 AC092919.2-201ENST00000623631 1645 ntBASIC17.72■□□□□ 0.43
RTN3O95197 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC17.72■□□□□ 0.43
RTN3O95197 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
RTN3O95197 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RTN3O95197 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC17.72■□□□□ 0.43
RTN3O95197 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
RTN3O95197 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC17.72■□□□□ 0.43
RTN3O95197 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC17.72■□□□□ 0.43
RTN3O95197 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RTN3O95197 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
RTN3O95197 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RTN3O95197 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
RTN3O95197 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
RTN3O95197 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC17.72■□□□□ 0.43
RTN3O95197 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RTN3O95197 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RTN3O95197 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC17.72■□□□□ 0.43
RTN3O95197 HMGA1P7-201ENST00000406908 502 ntBASIC17.72■□□□□ 0.43
RTN3O95197 RPS8P6-201ENST00000426177 609 ntBASIC17.72■□□□□ 0.43
RTN3O95197 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC17.72■□□□□ 0.43
RTN3O95197 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC17.72■□□□□ 0.43
RTN3O95197 CFL1-202ENST00000524553 860 ntTSL 2 BASIC17.72■□□□□ 0.43
RTN3O95197 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC17.72■□□□□ 0.43
RTN3O95197 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC17.72■□□□□ 0.43
RTN3O95197 AC087641.1-201ENST00000557561 1021 ntBASIC17.72■□□□□ 0.43
RTN3O95197 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC17.72■□□□□ 0.43
RTN3O95197 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC17.72■□□□□ 0.43
RTN3O95197 AP001160.2-201ENST00000596071 487 ntBASIC17.72■□□□□ 0.43
RTN3O95197 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC17.72■□□□□ 0.43
RTN3O95197 AC092902.6-201ENST00000641783 218 ntBASIC17.72■□□□□ 0.43
RTN3O95197 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
RTN3O95197 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
RTN3O95197 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RTN3O95197 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
RTN3O95197 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC17.72■□□□□ 0.43
RTN3O95197 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
RTN3O95197 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RTN3O95197 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RTN3O95197 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RTN3O95197 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC17.72■□□□□ 0.43
RTN3O95197 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RTN3O95197 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
RTN3O95197 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
RTN3O95197 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RTN3O95197 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
RTN3O95197 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RTN3O95197 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RTN3O95197 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC17.71■□□□□ 0.43
RTN3O95197 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RTN3O95197 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RTN3O95197 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RTN3O95197 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RTN3O95197 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC17.71■□□□□ 0.43
RTN3O95197 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
RTN3O95197 AC254562.1-201ENST00000417586 456 ntBASIC17.71■□□□□ 0.43
RTN3O95197 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
RTN3O95197 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
RTN3O95197 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC17.71■□□□□ 0.43
RTN3O95197 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
RTN3O95197 CCND1-203ENST00000536559 553 ntTSL 3 BASIC17.71■□□□□ 0.43
RTN3O95197 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
RTN3O95197 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
RTN3O95197 MPDU1-223ENST00000582151 728 ntBASIC17.71■□□□□ 0.43
RTN3O95197 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
RTN3O95197 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
RTN3O95197 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC17.71■□□□□ 0.43
RTN3O95197 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
RTN3O95197 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC17.71■□□□□ 0.43
RTN3O95197 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC17.71■□□□□ 0.43
RTN3O95197 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC17.71■□□□□ 0.43
RTN3O95197 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
RTN3O95197 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC17.71■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 97.4 ms