Protein–RNA interactions for Protein: O75346

ZNF253, Zinc finger protein 253, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF253O75346 AC139887.4-201ENST00000607877 719 ntBASIC13.18□□□□□ -0.3
ZNF253O75346 AC005363.2-201ENST00000618631 242 ntBASIC13.18□□□□□ -0.3
ZNF253O75346 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
ZNF253O75346 WDR6-223ENST00000627177 207 ntTSL 2 BASIC13.18□□□□□ -0.3
ZNF253O75346 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
ZNF253O75346 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC13.18□□□□□ -0.3
ZNF253O75346 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
ZNF253O75346 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
ZNF253O75346 EGFEM1P-202ENST00000431685 1563 ntBASIC13.18□□□□□ -0.3
ZNF253O75346 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC13.18□□□□□ -0.3
ZNF253O75346 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
ZNF253O75346 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
ZNF253O75346 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC13.18□□□□□ -0.3
ZNF253O75346 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
ZNF253O75346 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
ZNF253O75346 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC13.18□□□□□ -0.3
ZNF253O75346 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
ZNF253O75346 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
ZNF253O75346 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
ZNF253O75346 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC13.18□□□□□ -0.3
ZNF253O75346 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC13.18□□□□□ -0.3
ZNF253O75346 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
ZNF253O75346 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
ZNF253O75346 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
ZNF253O75346 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
ZNF253O75346 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
ZNF253O75346 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
ZNF253O75346 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
ZNF253O75346 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
ZNF253O75346 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
ZNF253O75346 Z83836.1-201ENST00000624605 1642 ntBASIC13.17□□□□□ -0.3
ZNF253O75346 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
ZNF253O75346 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
ZNF253O75346 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC13.17□□□□□ -0.3
ZNF253O75346 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
ZNF253O75346 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ZNF253O75346 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ZNF253O75346 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ZNF253O75346 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
ZNF253O75346 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
ZNF253O75346 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
ZNF253O75346 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
ZNF253O75346 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
ZNF253O75346 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC13.17□□□□□ -0.3
ZNF253O75346 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC13.17□□□□□ -0.3
ZNF253O75346 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
ZNF253O75346 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
ZNF253O75346 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ZNF253O75346 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ZNF253O75346 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
ZNF253O75346 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
ZNF253O75346 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ZNF253O75346 RNF152P1-201ENST00000397754 604 ntBASIC13.17□□□□□ -0.3
ZNF253O75346 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC13.17□□□□□ -0.3
ZNF253O75346 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
ZNF253O75346 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
ZNF253O75346 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC13.17□□□□□ -0.3
ZNF253O75346 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC13.17□□□□□ -0.3
ZNF253O75346 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC13.17□□□□□ -0.3
ZNF253O75346 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC13.17□□□□□ -0.3
ZNF253O75346 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
ZNF253O75346 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC13.17□□□□□ -0.3
ZNF253O75346 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC13.17□□□□□ -0.3
ZNF253O75346 AL353801.3-201ENST00000609898 542 ntBASIC13.17□□□□□ -0.3
ZNF253O75346 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
ZNF253O75346 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ZNF253O75346 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
ZNF253O75346 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ZNF253O75346 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
ZNF253O75346 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ZNF253O75346 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC13.17□□□□□ -0.3
ZNF253O75346 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
ZNF253O75346 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
ZNF253O75346 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
ZNF253O75346 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC13.17□□□□□ -0.3
ZNF253O75346 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ZNF253O75346 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
ZNF253O75346 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
ZNF253O75346 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ZNF253O75346 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ZNF253O75346 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ZNF253O75346 AL662844.4-201ENST00000606367 2838 ntBASIC13.17□□□□□ -0.3
ZNF253O75346 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ZNF253O75346 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC13.16□□□□□ -0.3
ZNF253O75346 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC13.16□□□□□ -0.3
ZNF253O75346 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ZNF253O75346 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC13.16□□□□□ -0.3
ZNF253O75346 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
ZNF253O75346 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC13.16□□□□□ -0.3
ZNF253O75346 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ZNF253O75346 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC13.16□□□□□ -0.3
ZNF253O75346 AC125634.1-201ENST00000438758 1403 ntBASIC13.16□□□□□ -0.3
ZNF253O75346 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC13.16□□□□□ -0.3
ZNF253O75346 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
ZNF253O75346 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ZNF253O75346 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC13.16□□□□□ -0.3
ZNF253O75346 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
ZNF253O75346 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ZNF253O75346 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
ZNF253O75346 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 63.9 ms