Protein–RNA interactions for Protein: O60330

PCDHGA12, Protocadherin gamma-A12, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA12O60330 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PCDHGA12O60330 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PCDHGA12O60330 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
PCDHGA12O60330 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PCDHGA12O60330 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC16.7■□□□□ 0.26
PCDHGA12O60330 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC16.7■□□□□ 0.26
PCDHGA12O60330 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PCDHGA12O60330 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC16.7■□□□□ 0.26
PCDHGA12O60330 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC16.7■□□□□ 0.26
PCDHGA12O60330 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PCDHGA12O60330 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PCDHGA12O60330 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
PCDHGA12O60330 AKAP8P1-201ENST00000434743 1349 ntBASIC16.7■□□□□ 0.26
PCDHGA12O60330 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC16.7■□□□□ 0.26
PCDHGA12O60330 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PCDHGA12O60330 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PCDHGA12O60330 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC16.69■□□□□ 0.26
PCDHGA12O60330 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC16.69■□□□□ 0.26
PCDHGA12O60330 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC16.69■□□□□ 0.26
PCDHGA12O60330 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
PCDHGA12O60330 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PCDHGA12O60330 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC16.69■□□□□ 0.26
PCDHGA12O60330 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC16.69■□□□□ 0.26
PCDHGA12O60330 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC16.69■□□□□ 0.26
PCDHGA12O60330 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC16.69■□□□□ 0.26
PCDHGA12O60330 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PCDHGA12O60330 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC16.69■□□□□ 0.26
PCDHGA12O60330 AC244107.1-201ENST00000442033 332 ntBASIC16.69■□□□□ 0.26
PCDHGA12O60330 TAF8-206ENST00000472818 719 ntTSL 2 BASIC16.69■□□□□ 0.26
PCDHGA12O60330 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
PCDHGA12O60330 AC079140.1-201ENST00000508039 487 ntBASIC16.69■□□□□ 0.26
PCDHGA12O60330 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC16.69■□□□□ 0.26
PCDHGA12O60330 VPS29-207ENST00000549970 818 ntTSL 3 BASIC16.69■□□□□ 0.26
PCDHGA12O60330 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
PCDHGA12O60330 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
PCDHGA12O60330 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
PCDHGA12O60330 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
PCDHGA12O60330 AL023806.1-201ENST00000603994 1649 ntBASIC16.69■□□□□ 0.26
PCDHGA12O60330 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
PCDHGA12O60330 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PCDHGA12O60330 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
PCDHGA12O60330 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
PCDHGA12O60330 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PCDHGA12O60330 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC16.69■□□□□ 0.26
PCDHGA12O60330 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
PCDHGA12O60330 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
PCDHGA12O60330 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC16.69■□□□□ 0.26
PCDHGA12O60330 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC16.69■□□□□ 0.26
PCDHGA12O60330 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC16.69■□□□□ 0.26
PCDHGA12O60330 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PCDHGA12O60330 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PCDHGA12O60330 BSG-215ENST00000618006 1329 ntTSL 2 BASIC16.69■□□□□ 0.26
PCDHGA12O60330 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PCDHGA12O60330 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC16.69■□□□□ 0.26
PCDHGA12O60330 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PCDHGA12O60330 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
PCDHGA12O60330 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PCDHGA12O60330 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PCDHGA12O60330 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
PCDHGA12O60330 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC16.68■□□□□ 0.26
PCDHGA12O60330 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
PCDHGA12O60330 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
PCDHGA12O60330 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
PCDHGA12O60330 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
PCDHGA12O60330 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
PCDHGA12O60330 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
PCDHGA12O60330 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PCDHGA12O60330 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PCDHGA12O60330 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC16.68■□□□□ 0.26
PCDHGA12O60330 TFAMP1-201ENST00000412727 736 ntBASIC16.68■□□□□ 0.26
PCDHGA12O60330 WBP2-203ENST00000433525 928 ntTSL 2 BASIC16.68■□□□□ 0.26
PCDHGA12O60330 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
PCDHGA12O60330 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC16.68■□□□□ 0.26
PCDHGA12O60330 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC16.68■□□□□ 0.26
PCDHGA12O60330 AC069262.1-201ENST00000539058 672 ntBASIC16.68■□□□□ 0.26
PCDHGA12O60330 DUX4L27-201ENST00000554796 1261 ntBASIC16.68■□□□□ 0.26
PCDHGA12O60330 AC051619.7-201ENST00000568314 623 ntBASIC16.68■□□□□ 0.26
PCDHGA12O60330 AP001059.3-201ENST00000619053 235 ntBASIC16.68■□□□□ 0.26
PCDHGA12O60330 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
PCDHGA12O60330 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PCDHGA12O60330 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PCDHGA12O60330 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
PCDHGA12O60330 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
PCDHGA12O60330 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC16.68■□□□□ 0.26
PCDHGA12O60330 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
PCDHGA12O60330 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC16.68■□□□□ 0.26
PCDHGA12O60330 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PCDHGA12O60330 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PCDHGA12O60330 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PCDHGA12O60330 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PCDHGA12O60330 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
PCDHGA12O60330 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PCDHGA12O60330 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
PCDHGA12O60330 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
PCDHGA12O60330 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
PCDHGA12O60330 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC16.67■□□□□ 0.26
PCDHGA12O60330 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PCDHGA12O60330 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
PCDHGA12O60330 HARS-203ENST00000431330 1774 ntTSL 2 BASIC16.67■□□□□ 0.26
PCDHGA12O60330 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms