Protein–RNA interactions for Protein: O14917

PCDH17, Protocadherin-17, humanhuman

Predictions only

Length 1,159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17O14917 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC16.1■□□□□ 0.17
PCDH17O14917 MTDHP5-201ENST00000598980 586 ntBASIC16.1■□□□□ 0.17
PCDH17O14917 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC16.1■□□□□ 0.17
PCDH17O14917 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC16.1■□□□□ 0.17
PCDH17O14917 AL691403.2-201ENST00000618460 490 ntBASIC16.1■□□□□ 0.17
PCDH17O14917 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
PCDH17O14917 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
PCDH17O14917 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PCDH17O14917 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC16.1■□□□□ 0.17
PCDH17O14917 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PCDH17O14917 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PCDH17O14917 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
PCDH17O14917 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PCDH17O14917 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PCDH17O14917 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PCDH17O14917 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC16.1■□□□□ 0.17
PCDH17O14917 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
PCDH17O14917 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC16.1■□□□□ 0.17
PCDH17O14917 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PCDH17O14917 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PCDH17O14917 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PCDH17O14917 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
PCDH17O14917 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC16.1■□□□□ 0.17
PCDH17O14917 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
PCDH17O14917 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC16.1■□□□□ 0.17
PCDH17O14917 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
PCDH17O14917 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
PCDH17O14917 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PCDH17O14917 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
PCDH17O14917 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC16.09■□□□□ 0.17
PCDH17O14917 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
PCDH17O14917 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PCDH17O14917 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PCDH17O14917 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PCDH17O14917 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PCDH17O14917 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PCDH17O14917 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PCDH17O14917 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
PCDH17O14917 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PCDH17O14917 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PCDH17O14917 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
PCDH17O14917 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PCDH17O14917 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PCDH17O14917 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC16.09■□□□□ 0.17
PCDH17O14917 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC16.09■□□□□ 0.17
PCDH17O14917 SLC25A1P3-201ENST00000395415 828 ntBASIC16.09■□□□□ 0.17
PCDH17O14917 PMP22-202ENST00000395936 816 ntTSL 3 BASIC16.09■□□□□ 0.17
PCDH17O14917 UPF3AP3-201ENST00000420996 769 ntBASIC16.09■□□□□ 0.17
PCDH17O14917 HCG4B-203ENST00000450128 991 ntBASIC16.09■□□□□ 0.17
PCDH17O14917 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC16.09■□□□□ 0.17
PCDH17O14917 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC16.09■□□□□ 0.17
PCDH17O14917 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC16.09■□□□□ 0.17
PCDH17O14917 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC16.09■□□□□ 0.17
PCDH17O14917 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC16.09■□□□□ 0.17
PCDH17O14917 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC16.09■□□□□ 0.17
PCDH17O14917 MIR3687-2-201ENST00000577708 61 ntBASIC16.09■□□□□ 0.17
PCDH17O14917 MIR3687-1-201ENST00000614492 61 ntBASIC16.09■□□□□ 0.17
PCDH17O14917 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC16.09■□□□□ 0.17
PCDH17O14917 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC16.09■□□□□ 0.17
PCDH17O14917 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
PCDH17O14917 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
PCDH17O14917 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC16.09■□□□□ 0.17
PCDH17O14917 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
PCDH17O14917 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
PCDH17O14917 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PCDH17O14917 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PCDH17O14917 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
PCDH17O14917 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PCDH17O14917 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC16.09■□□□□ 0.17
PCDH17O14917 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PCDH17O14917 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
PCDH17O14917 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
PCDH17O14917 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC16.08■□□□□ 0.17
PCDH17O14917 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
PCDH17O14917 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
PCDH17O14917 PI4KAP1-204ENST00000612579 1703 ntBASIC16.08■□□□□ 0.17
PCDH17O14917 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
PCDH17O14917 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
PCDH17O14917 OR6D1P-203ENST00000641209 4860 ntBASIC16.08■□□□□ 0.17
PCDH17O14917 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
PCDH17O14917 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
PCDH17O14917 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PCDH17O14917 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC16.08■□□□□ 0.16
PCDH17O14917 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PCDH17O14917 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC16.08■□□□□ 0.16
PCDH17O14917 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC16.08■□□□□ 0.16
PCDH17O14917 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
PCDH17O14917 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PCDH17O14917 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
PCDH17O14917 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC16.08■□□□□ 0.16
PCDH17O14917 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC16.08■□□□□ 0.16
PCDH17O14917 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC16.08■□□□□ 0.16
PCDH17O14917 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC16.08■□□□□ 0.16
PCDH17O14917 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC16.08■□□□□ 0.16
PCDH17O14917 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC16.08■□□□□ 0.16
PCDH17O14917 AC004790.2-201ENST00000623588 572 ntBASIC16.08■□□□□ 0.16
PCDH17O14917 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC16.08■□□□□ 0.16
PCDH17O14917 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PCDH17O14917 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC16.08■□□□□ 0.16
PCDH17O14917 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms