Protein–RNA interactions for Protein: O00526

UPK2, Uroplakin-2, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK2O00526 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC13.52□□□□□ -0.25
UPK2O00526 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC13.52□□□□□ -0.25
UPK2O00526 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
UPK2O00526 AC092364.2-201ENST00000596710 2692 ntBASIC13.52□□□□□ -0.25
UPK2O00526 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
UPK2O00526 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC13.52□□□□□ -0.25
UPK2O00526 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC13.52□□□□□ -0.25
UPK2O00526 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
UPK2O00526 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC13.51□□□□□ -0.25
UPK2O00526 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
UPK2O00526 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC13.51□□□□□ -0.25
UPK2O00526 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
UPK2O00526 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
UPK2O00526 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
UPK2O00526 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
UPK2O00526 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC13.51□□□□□ -0.25
UPK2O00526 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
UPK2O00526 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC13.51□□□□□ -0.25
UPK2O00526 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
UPK2O00526 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
UPK2O00526 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
UPK2O00526 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
UPK2O00526 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
UPK2O00526 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
UPK2O00526 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
UPK2O00526 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC13.51□□□□□ -0.25
UPK2O00526 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC13.51□□□□□ -0.25
UPK2O00526 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC13.51□□□□□ -0.25
UPK2O00526 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC13.51□□□□□ -0.25
UPK2O00526 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
UPK2O00526 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC13.51□□□□□ -0.25
UPK2O00526 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
UPK2O00526 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
UPK2O00526 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
UPK2O00526 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC13.51□□□□□ -0.25
UPK2O00526 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
UPK2O00526 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
UPK2O00526 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
UPK2O00526 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
UPK2O00526 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC13.51□□□□□ -0.25
UPK2O00526 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
UPK2O00526 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
UPK2O00526 PAWRP1-201ENST00000451083 565 ntBASIC13.51□□□□□ -0.25
UPK2O00526 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC13.51□□□□□ -0.25
UPK2O00526 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC13.51□□□□□ -0.25
UPK2O00526 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC13.51□□□□□ -0.25
UPK2O00526 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC13.51□□□□□ -0.25
UPK2O00526 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
UPK2O00526 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC13.51□□□□□ -0.25
UPK2O00526 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC13.51□□□□□ -0.25
UPK2O00526 AL355877.3-201ENST00000622820 899 ntBASIC13.51□□□□□ -0.25
UPK2O00526 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
UPK2O00526 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
UPK2O00526 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
UPK2O00526 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
UPK2O00526 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
UPK2O00526 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC13.51□□□□□ -0.25
UPK2O00526 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
UPK2O00526 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
UPK2O00526 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC13.51□□□□□ -0.25
UPK2O00526 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
UPK2O00526 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC13.51□□□□□ -0.25
UPK2O00526 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
UPK2O00526 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
UPK2O00526 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
UPK2O00526 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
UPK2O00526 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC13.5□□□□□ -0.25
UPK2O00526 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC13.5□□□□□ -0.25
UPK2O00526 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC13.5□□□□□ -0.25
UPK2O00526 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
UPK2O00526 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
UPK2O00526 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
UPK2O00526 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
UPK2O00526 PAN3-AS1-201ENST00000563843 1351 ntBASIC13.5□□□□□ -0.25
UPK2O00526 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
UPK2O00526 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
UPK2O00526 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
UPK2O00526 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
UPK2O00526 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
UPK2O00526 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC13.5□□□□□ -0.25
UPK2O00526 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
UPK2O00526 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC13.5□□□□□ -0.25
UPK2O00526 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC13.5□□□□□ -0.25
UPK2O00526 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC13.5□□□□□ -0.25
UPK2O00526 LSM5-204ENST00000409909 740 ntTSL 2 BASIC13.5□□□□□ -0.25
UPK2O00526 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
UPK2O00526 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
UPK2O00526 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
UPK2O00526 MSRA-206ENST00000521209 814 ntTSL 3 BASIC13.5□□□□□ -0.25
UPK2O00526 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
UPK2O00526 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC13.5□□□□□ -0.25
UPK2O00526 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC13.5□□□□□ -0.25
UPK2O00526 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC13.5□□□□□ -0.25
UPK2O00526 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC13.5□□□□□ -0.25
UPK2O00526 MIR3652-201ENST00000579335 131 ntBASIC13.5□□□□□ -0.25
UPK2O00526 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
UPK2O00526 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC13.5□□□□□ -0.25
UPK2O00526 AL121772.3-201ENST00000610840 674 ntBASIC13.5□□□□□ -0.25
UPK2O00526 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
UPK2O00526 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms