Protein–RNA interactions for Protein: E9PAV3

NACA, Nascent polypeptide-associated complex subunit alpha, muscle-specific form, humanhuman

Predictions only

Length 2,078 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NACAE9PAV3 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
NACAE9PAV3 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC12.38□□□□□ -0.43
NACAE9PAV3 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
NACAE9PAV3 AC009336.1-201ENST00000608941 1553 ntBASIC12.38□□□□□ -0.43
NACAE9PAV3 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC12.38□□□□□ -0.43
NACAE9PAV3 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
NACAE9PAV3 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
NACAE9PAV3 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC12.38□□□□□ -0.43
NACAE9PAV3 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
NACAE9PAV3 AC092068.3-201ENST00000587894 2016 ntBASIC12.38□□□□□ -0.43
NACAE9PAV3 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
NACAE9PAV3 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC12.38□□□□□ -0.43
NACAE9PAV3 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
NACAE9PAV3 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
NACAE9PAV3 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
NACAE9PAV3 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
NACAE9PAV3 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
NACAE9PAV3 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
NACAE9PAV3 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
NACAE9PAV3 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
NACAE9PAV3 RNF216P1-203ENST00000404404 2427 ntBASIC12.38□□□□□ -0.43
NACAE9PAV3 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
NACAE9PAV3 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC12.38□□□□□ -0.43
NACAE9PAV3 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
NACAE9PAV3 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
NACAE9PAV3 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC12.38□□□□□ -0.43
NACAE9PAV3 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
NACAE9PAV3 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
NACAE9PAV3 AC092053.1-201ENST00000605787 1936 ntBASIC12.38□□□□□ -0.43
NACAE9PAV3 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
NACAE9PAV3 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
NACAE9PAV3 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC12.38□□□□□ -0.43
NACAE9PAV3 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC12.38□□□□□ -0.43
NACAE9PAV3 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
NACAE9PAV3 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
NACAE9PAV3 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
NACAE9PAV3 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC12.38□□□□□ -0.43
NACAE9PAV3 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
NACAE9PAV3 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
NACAE9PAV3 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC12.38□□□□□ -0.43
NACAE9PAV3 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC12.38□□□□□ -0.43
NACAE9PAV3 AC018712.1-201ENST00000455767 687 ntBASIC12.38□□□□□ -0.43
NACAE9PAV3 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC12.38□□□□□ -0.43
NACAE9PAV3 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC12.38□□□□□ -0.43
NACAE9PAV3 AL662844.1-201ENST00000546340 181 ntBASIC12.38□□□□□ -0.43
NACAE9PAV3 AC124947.2-201ENST00000547118 1133 ntBASIC12.38□□□□□ -0.43
NACAE9PAV3 AC091304.2-201ENST00000564639 760 ntBASIC12.38□□□□□ -0.43
NACAE9PAV3 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
NACAE9PAV3 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
NACAE9PAV3 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
NACAE9PAV3 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC12.37□□□□□ -0.43
NACAE9PAV3 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
NACAE9PAV3 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC12.37□□□□□ -0.43
NACAE9PAV3 AC004817.3-201ENST00000602957 2129 ntBASIC12.37□□□□□ -0.43
NACAE9PAV3 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
NACAE9PAV3 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC12.37□□□□□ -0.43
NACAE9PAV3 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
NACAE9PAV3 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC12.37□□□□□ -0.43
NACAE9PAV3 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
NACAE9PAV3 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
NACAE9PAV3 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
NACAE9PAV3 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC12.37□□□□□ -0.43
NACAE9PAV3 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
NACAE9PAV3 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC12.37□□□□□ -0.43
NACAE9PAV3 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC12.37□□□□□ -0.43
NACAE9PAV3 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
NACAE9PAV3 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
NACAE9PAV3 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
NACAE9PAV3 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
NACAE9PAV3 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
NACAE9PAV3 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
NACAE9PAV3 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC12.37□□□□□ -0.43
NACAE9PAV3 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
NACAE9PAV3 MYCLP1-201ENST00000372451 1075 ntBASIC12.37□□□□□ -0.43
NACAE9PAV3 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
NACAE9PAV3 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
NACAE9PAV3 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
NACAE9PAV3 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
NACAE9PAV3 STK19B-204ENST00000512515 211 ntBASIC12.37□□□□□ -0.43
NACAE9PAV3 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC12.37□□□□□ -0.43
NACAE9PAV3 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC12.37□□□□□ -0.43
NACAE9PAV3 MIR7706-201ENST00000613747 67 ntBASIC12.37□□□□□ -0.43
NACAE9PAV3 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC12.37□□□□□ -0.43
NACAE9PAV3 CELSR1-201ENST00000262738 11389 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
NACAE9PAV3 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
NACAE9PAV3 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC12.37□□□□□ -0.43
NACAE9PAV3 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
NACAE9PAV3 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC12.37□□□□□ -0.43
NACAE9PAV3 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
NACAE9PAV3 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
NACAE9PAV3 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC12.37□□□□□ -0.43
NACAE9PAV3 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
NACAE9PAV3 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC12.37□□□□□ -0.43
NACAE9PAV3 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
NACAE9PAV3 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
NACAE9PAV3 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
NACAE9PAV3 TRIM56-201ENST00000306085 10952 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
NACAE9PAV3 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC12.36□□□□□ -0.43
NACAE9PAV3 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
NACAE9PAV3 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms