Protein–RNA interactions for Protein: A0A1B0GUT2

LINC00959, HCG1648656, isoform CRA_a, humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00959A0A1B0GUT2 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC11.51□□□□□ -0.57
LINC00959A0A1B0GUT2 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
LINC00959A0A1B0GUT2 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
LINC00959A0A1B0GUT2 GID4-202ENST00000376345 1391 ntTSL 3 BASIC11.51□□□□□ -0.57
LINC00959A0A1B0GUT2 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC11.51□□□□□ -0.57
LINC00959A0A1B0GUT2 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
LINC00959A0A1B0GUT2 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC11.51□□□□□ -0.57
LINC00959A0A1B0GUT2 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC11.51□□□□□ -0.57
LINC00959A0A1B0GUT2 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
LINC00959A0A1B0GUT2 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC11.51□□□□□ -0.57
LINC00959A0A1B0GUT2 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
LINC00959A0A1B0GUT2 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
LINC00959A0A1B0GUT2 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
LINC00959A0A1B0GUT2 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
LINC00959A0A1B0GUT2 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC11.51□□□□□ -0.57
LINC00959A0A1B0GUT2 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
LINC00959A0A1B0GUT2 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
LINC00959A0A1B0GUT2 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC11.51□□□□□ -0.57
LINC00959A0A1B0GUT2 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC11.5□□□□□ -0.57
LINC00959A0A1B0GUT2 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC11.5□□□□□ -0.57
LINC00959A0A1B0GUT2 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
LINC00959A0A1B0GUT2 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC11.5□□□□□ -0.57
LINC00959A0A1B0GUT2 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
LINC00959A0A1B0GUT2 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
LINC00959A0A1B0GUT2 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
LINC00959A0A1B0GUT2 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
LINC00959A0A1B0GUT2 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
LINC00959A0A1B0GUT2 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC11.5□□□□□ -0.57
LINC00959A0A1B0GUT2 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
LINC00959A0A1B0GUT2 PC-204ENST00000524491 1714 ntTSL 2 BASIC11.5□□□□□ -0.57
LINC00959A0A1B0GUT2 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
LINC00959A0A1B0GUT2 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
LINC00959A0A1B0GUT2 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC11.5□□□□□ -0.57
LINC00959A0A1B0GUT2 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
LINC00959A0A1B0GUT2 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC11.5□□□□□ -0.57
LINC00959A0A1B0GUT2 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
LINC00959A0A1B0GUT2 RBSN-204ENST00000449050 903 ntTSL 2 BASIC11.5□□□□□ -0.57
LINC00959A0A1B0GUT2 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC11.5□□□□□ -0.57
LINC00959A0A1B0GUT2 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
LINC00959A0A1B0GUT2 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC11.5□□□□□ -0.57
LINC00959A0A1B0GUT2 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC11.5□□□□□ -0.57
LINC00959A0A1B0GUT2 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC11.5□□□□□ -0.57
LINC00959A0A1B0GUT2 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC11.5□□□□□ -0.57
LINC00959A0A1B0GUT2 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC11.5□□□□□ -0.57
LINC00959A0A1B0GUT2 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC11.5□□□□□ -0.57
LINC00959A0A1B0GUT2 MIR5100-201ENST00000579544 119 ntBASIC11.5□□□□□ -0.57
LINC00959A0A1B0GUT2 CYB561-217ENST00000582997 877 ntTSL 5 BASIC11.5□□□□□ -0.57
LINC00959A0A1B0GUT2 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
LINC00959A0A1B0GUT2 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC11.5□□□□□ -0.57
LINC00959A0A1B0GUT2 ABBA01031661.1-201ENST00000634362 1253 ntBASIC11.5□□□□□ -0.57
LINC00959A0A1B0GUT2 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC11.5□□□□□ -0.57
LINC00959A0A1B0GUT2 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC11.5□□□□□ -0.57
LINC00959A0A1B0GUT2 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC11.5□□□□□ -0.57
LINC00959A0A1B0GUT2 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
LINC00959A0A1B0GUT2 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
LINC00959A0A1B0GUT2 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
LINC00959A0A1B0GUT2 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
LINC00959A0A1B0GUT2 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
LINC00959A0A1B0GUT2 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
LINC00959A0A1B0GUT2 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
LINC00959A0A1B0GUT2 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
LINC00959A0A1B0GUT2 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
LINC00959A0A1B0GUT2 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
LINC00959A0A1B0GUT2 AC243591.1-201ENST00000452967 1364 ntBASIC11.5□□□□□ -0.57
LINC00959A0A1B0GUT2 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
LINC00959A0A1B0GUT2 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC11.5□□□□□ -0.57
LINC00959A0A1B0GUT2 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
LINC00959A0A1B0GUT2 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
LINC00959A0A1B0GUT2 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC11.5□□□□□ -0.57
LINC00959A0A1B0GUT2 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
LINC00959A0A1B0GUT2 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
LINC00959A0A1B0GUT2 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
LINC00959A0A1B0GUT2 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
LINC00959A0A1B0GUT2 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC11.5□□□□□ -0.57
LINC00959A0A1B0GUT2 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
LINC00959A0A1B0GUT2 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC11.5□□□□□ -0.57
LINC00959A0A1B0GUT2 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC11.5□□□□□ -0.57
LINC00959A0A1B0GUT2 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC11.5□□□□□ -0.57
LINC00959A0A1B0GUT2 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
LINC00959A0A1B0GUT2 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
LINC00959A0A1B0GUT2 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC11.49□□□□□ -0.57
LINC00959A0A1B0GUT2 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC11.49□□□□□ -0.57
LINC00959A0A1B0GUT2 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
LINC00959A0A1B0GUT2 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
LINC00959A0A1B0GUT2 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC11.49□□□□□ -0.57
LINC00959A0A1B0GUT2 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
LINC00959A0A1B0GUT2 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
LINC00959A0A1B0GUT2 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
LINC00959A0A1B0GUT2 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
LINC00959A0A1B0GUT2 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
LINC00959A0A1B0GUT2 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC11.49□□□□□ -0.57
LINC00959A0A1B0GUT2 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
LINC00959A0A1B0GUT2 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
LINC00959A0A1B0GUT2 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
LINC00959A0A1B0GUT2 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
LINC00959A0A1B0GUT2 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
LINC00959A0A1B0GUT2 NUS1P2-201ENST00000417358 873 ntBASIC11.49□□□□□ -0.57
LINC00959A0A1B0GUT2 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
LINC00959A0A1B0GUT2 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
LINC00959A0A1B0GUT2 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms