Protein–RNA interactions for Protein: A0A0A0MS02

TRGV1, T-cell receptor gamma variable 1 (non-functional) (Fragment), humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV1A0A0A0MS02 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
TRGV1A0A0A0MS02 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC12.26□□□□□ -0.45
TRGV1A0A0A0MS02 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
TRGV1A0A0A0MS02 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC12.26□□□□□ -0.45
TRGV1A0A0A0MS02 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC12.26□□□□□ -0.45
TRGV1A0A0A0MS02 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC12.26□□□□□ -0.45
TRGV1A0A0A0MS02 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC12.26□□□□□ -0.45
TRGV1A0A0A0MS02 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
TRGV1A0A0A0MS02 CES3-203ENST00000543856 3178 ntTSL 2 BASIC12.26□□□□□ -0.45
TRGV1A0A0A0MS02 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
TRGV1A0A0A0MS02 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC12.26□□□□□ -0.45
TRGV1A0A0A0MS02 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
TRGV1A0A0A0MS02 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC12.26□□□□□ -0.45
TRGV1A0A0A0MS02 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC12.26□□□□□ -0.45
TRGV1A0A0A0MS02 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC12.26□□□□□ -0.45
TRGV1A0A0A0MS02 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC12.26□□□□□ -0.45
TRGV1A0A0A0MS02 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC12.26□□□□□ -0.45
TRGV1A0A0A0MS02 FGFR3P6-201ENST00000457012 610 ntBASIC12.26□□□□□ -0.45
TRGV1A0A0A0MS02 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC12.26□□□□□ -0.45
TRGV1A0A0A0MS02 SART3-203ENST00000546611 1184 ntBASIC12.26□□□□□ -0.45
TRGV1A0A0A0MS02 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
TRGV1A0A0A0MS02 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC12.26□□□□□ -0.45
TRGV1A0A0A0MS02 RNF151-202ENST00000569210 853 ntTSL 2 BASIC12.26□□□□□ -0.45
TRGV1A0A0A0MS02 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC12.26□□□□□ -0.45
TRGV1A0A0A0MS02 MTDHP4-201ENST00000600287 670 ntBASIC12.26□□□□□ -0.45
TRGV1A0A0A0MS02 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
TRGV1A0A0A0MS02 AL353135.1-201ENST00000606729 504 ntBASIC12.26□□□□□ -0.45
TRGV1A0A0A0MS02 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC12.26□□□□□ -0.45
TRGV1A0A0A0MS02 AL589182.2-201ENST00000619332 1049 ntBASIC12.26□□□□□ -0.45
TRGV1A0A0A0MS02 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC12.26□□□□□ -0.45
TRGV1A0A0A0MS02 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
TRGV1A0A0A0MS02 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
TRGV1A0A0A0MS02 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC12.26□□□□□ -0.45
TRGV1A0A0A0MS02 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
TRGV1A0A0A0MS02 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
TRGV1A0A0A0MS02 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
TRGV1A0A0A0MS02 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC12.26□□□□□ -0.45
TRGV1A0A0A0MS02 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
TRGV1A0A0A0MS02 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
TRGV1A0A0A0MS02 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
TRGV1A0A0A0MS02 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC12.26□□□□□ -0.45
TRGV1A0A0A0MS02 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
TRGV1A0A0A0MS02 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
TRGV1A0A0A0MS02 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC12.26□□□□□ -0.45
TRGV1A0A0A0MS02 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
TRGV1A0A0A0MS02 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
TRGV1A0A0A0MS02 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
TRGV1A0A0A0MS02 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
TRGV1A0A0A0MS02 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
TRGV1A0A0A0MS02 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC12.25□□□□□ -0.45
TRGV1A0A0A0MS02 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
TRGV1A0A0A0MS02 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC12.25□□□□□ -0.45
TRGV1A0A0A0MS02 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC12.25□□□□□ -0.45
TRGV1A0A0A0MS02 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC12.25□□□□□ -0.45
TRGV1A0A0A0MS02 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
TRGV1A0A0A0MS02 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
TRGV1A0A0A0MS02 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC12.25□□□□□ -0.45
TRGV1A0A0A0MS02 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
TRGV1A0A0A0MS02 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
TRGV1A0A0A0MS02 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
TRGV1A0A0A0MS02 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
TRGV1A0A0A0MS02 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
TRGV1A0A0A0MS02 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC12.25□□□□□ -0.45
TRGV1A0A0A0MS02 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
TRGV1A0A0A0MS02 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
TRGV1A0A0A0MS02 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC12.25□□□□□ -0.45
TRGV1A0A0A0MS02 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC12.25□□□□□ -0.45
TRGV1A0A0A0MS02 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC12.25□□□□□ -0.45
TRGV1A0A0A0MS02 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
TRGV1A0A0A0MS02 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC12.25□□□□□ -0.45
TRGV1A0A0A0MS02 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
TRGV1A0A0A0MS02 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC12.25□□□□□ -0.45
TRGV1A0A0A0MS02 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC12.25□□□□□ -0.45
TRGV1A0A0A0MS02 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
TRGV1A0A0A0MS02 AP002490.2-201ENST00000524791 560 ntBASIC12.25□□□□□ -0.45
TRGV1A0A0A0MS02 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC12.25□□□□□ -0.45
TRGV1A0A0A0MS02 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC12.25□□□□□ -0.45
TRGV1A0A0A0MS02 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC12.25□□□□□ -0.45
TRGV1A0A0A0MS02 SDCCAG3P1-201ENST00000589292 1150 ntBASIC12.25□□□□□ -0.45
TRGV1A0A0A0MS02 AL139424.1-201ENST00000607572 797 ntBASIC12.25□□□□□ -0.45
TRGV1A0A0A0MS02 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
TRGV1A0A0A0MS02 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
TRGV1A0A0A0MS02 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
TRGV1A0A0A0MS02 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
TRGV1A0A0A0MS02 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC12.25□□□□□ -0.45
TRGV1A0A0A0MS02 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
TRGV1A0A0A0MS02 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC12.25□□□□□ -0.45
TRGV1A0A0A0MS02 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
TRGV1A0A0A0MS02 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
TRGV1A0A0A0MS02 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
TRGV1A0A0A0MS02 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC12.25□□□□□ -0.45
TRGV1A0A0A0MS02 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC12.25□□□□□ -0.45
TRGV1A0A0A0MS02 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
TRGV1A0A0A0MS02 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC12.25□□□□□ -0.45
TRGV1A0A0A0MS02 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC12.25□□□□□ -0.45
TRGV1A0A0A0MS02 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
TRGV1A0A0A0MS02 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC12.25□□□□□ -0.45
TRGV1A0A0A0MS02 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC12.25□□□□□ -0.45
TRGV1A0A0A0MS02 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
TRGV1A0A0A0MS02 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms