Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC15.87■□□□□ 0.13
CCDC187A0A096LP49 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CCDC187A0A096LP49 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC15.87■□□□□ 0.13
CCDC187A0A096LP49 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC15.87■□□□□ 0.13
CCDC187A0A096LP49 COQ9-214ENST00000567933 882 ntTSL 3 BASIC15.87■□□□□ 0.13
CCDC187A0A096LP49 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC15.87■□□□□ 0.13
CCDC187A0A096LP49 AL138828.2-201ENST00000615812 383 ntBASIC15.87■□□□□ 0.13
CCDC187A0A096LP49 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
CCDC187A0A096LP49 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CCDC187A0A096LP49 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC15.87■□□□□ 0.13
CCDC187A0A096LP49 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
CCDC187A0A096LP49 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC15.87■□□□□ 0.13
CCDC187A0A096LP49 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC15.87■□□□□ 0.13
CCDC187A0A096LP49 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CCDC187A0A096LP49 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CCDC187A0A096LP49 CD276-203ENST00000537340 2439 ntTSL 2 BASIC15.87■□□□□ 0.13
CCDC187A0A096LP49 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC15.87■□□□□ 0.13
CCDC187A0A096LP49 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CCDC187A0A096LP49 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
CCDC187A0A096LP49 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CCDC187A0A096LP49 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC15.87■□□□□ 0.13
CCDC187A0A096LP49 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC15.87■□□□□ 0.13
CCDC187A0A096LP49 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
CCDC187A0A096LP49 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC15.87■□□□□ 0.13
CCDC187A0A096LP49 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CCDC187A0A096LP49 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
CCDC187A0A096LP49 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CCDC187A0A096LP49 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CCDC187A0A096LP49 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CCDC187A0A096LP49 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CCDC187A0A096LP49 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC15.86■□□□□ 0.13
CCDC187A0A096LP49 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
CCDC187A0A096LP49 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC15.86■□□□□ 0.13
CCDC187A0A096LP49 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CCDC187A0A096LP49 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
CCDC187A0A096LP49 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CCDC187A0A096LP49 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CCDC187A0A096LP49 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CCDC187A0A096LP49 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CCDC187A0A096LP49 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CCDC187A0A096LP49 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC15.86■□□□□ 0.13
CCDC187A0A096LP49 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CCDC187A0A096LP49 HLA-H-201ENST00000383620 1096 ntBASIC15.86■□□□□ 0.13
CCDC187A0A096LP49 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC15.86■□□□□ 0.13
CCDC187A0A096LP49 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CCDC187A0A096LP49 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC15.86■□□□□ 0.13
CCDC187A0A096LP49 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC15.86■□□□□ 0.13
CCDC187A0A096LP49 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CCDC187A0A096LP49 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC15.86■□□□□ 0.13
CCDC187A0A096LP49 RN7SL692P-201ENST00000464677 288 ntBASIC15.86■□□□□ 0.13
CCDC187A0A096LP49 SATB1-217ENST00000493952 626 ntTSL 3 BASIC15.86■□□□□ 0.13
CCDC187A0A096LP49 GPER1-207ENST00000619052 571 ntTSL 2 BASIC15.86■□□□□ 0.13
CCDC187A0A096LP49 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CCDC187A0A096LP49 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CCDC187A0A096LP49 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC15.86■□□□□ 0.13
CCDC187A0A096LP49 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CCDC187A0A096LP49 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC15.86■□□□□ 0.13
CCDC187A0A096LP49 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
CCDC187A0A096LP49 LINC00895-201ENST00000629028 1637 ntBASIC15.86■□□□□ 0.13
CCDC187A0A096LP49 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CCDC187A0A096LP49 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
CCDC187A0A096LP49 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
CCDC187A0A096LP49 AL035456.1-201ENST00000456064 1369 ntBASIC15.86■□□□□ 0.13
CCDC187A0A096LP49 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC15.86■□□□□ 0.13
CCDC187A0A096LP49 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CCDC187A0A096LP49 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CCDC187A0A096LP49 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC15.85■□□□□ 0.13
CCDC187A0A096LP49 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
CCDC187A0A096LP49 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CCDC187A0A096LP49 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CCDC187A0A096LP49 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
CCDC187A0A096LP49 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CCDC187A0A096LP49 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC15.85■□□□□ 0.13
CCDC187A0A096LP49 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
CCDC187A0A096LP49 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC15.85■□□□□ 0.13
CCDC187A0A096LP49 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC15.85■□□□□ 0.13
CCDC187A0A096LP49 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CCDC187A0A096LP49 CALY-202ENST00000368555 783 ntTSL 2 BASIC15.85■□□□□ 0.13
CCDC187A0A096LP49 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC15.85■□□□□ 0.13
CCDC187A0A096LP49 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CCDC187A0A096LP49 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CCDC187A0A096LP49 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CCDC187A0A096LP49 AL353705.2-201ENST00000428243 662 ntBASIC15.85■□□□□ 0.13
CCDC187A0A096LP49 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC15.85■□□□□ 0.13
CCDC187A0A096LP49 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CCDC187A0A096LP49 PRYP6-201ENST00000514804 343 ntBASIC15.85■□□□□ 0.13
CCDC187A0A096LP49 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
CCDC187A0A096LP49 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC15.85■□□□□ 0.13
CCDC187A0A096LP49 AL596325.1-201ENST00000563991 1082 ntBASIC15.85■□□□□ 0.13
CCDC187A0A096LP49 MPI-209ENST00000564003 1195 ntTSL 2 BASIC15.85■□□□□ 0.13
CCDC187A0A096LP49 MIR4492-201ENST00000581627 80 ntBASIC15.85■□□□□ 0.13
CCDC187A0A096LP49 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC15.85■□□□□ 0.13
CCDC187A0A096LP49 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC15.85■□□□□ 0.13
CCDC187A0A096LP49 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CCDC187A0A096LP49 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CCDC187A0A096LP49 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
CCDC187A0A096LP49 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CCDC187A0A096LP49 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CCDC187A0A096LP49 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CCDC187A0A096LP49 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms