Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 AC139887.3-201ENST00000568585 713 ntBASIC12.74□□□□□ -0.37
HLA-DRB4X5D2U9 MTDHP4-201ENST00000600287 670 ntBASIC12.74□□□□□ -0.37
HLA-DRB4X5D2U9 AL353135.1-201ENST00000606729 504 ntBASIC12.74□□□□□ -0.37
HLA-DRB4X5D2U9 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
HLA-DRB4X5D2U9 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
HLA-DRB4X5D2U9 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
HLA-DRB4X5D2U9 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
HLA-DRB4X5D2U9 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
HLA-DRB4X5D2U9 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC12.74□□□□□ -0.37
HLA-DRB4X5D2U9 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC12.74□□□□□ -0.37
HLA-DRB4X5D2U9 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
HLA-DRB4X5D2U9 AC008741.2-201ENST00000612792 3115 ntBASIC12.74□□□□□ -0.37
HLA-DRB4X5D2U9 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
HLA-DRB4X5D2U9 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
HLA-DRB4X5D2U9 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
HLA-DRB4X5D2U9 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
HLA-DRB4X5D2U9 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
HLA-DRB4X5D2U9 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC12.74□□□□□ -0.37
HLA-DRB4X5D2U9 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC12.74□□□□□ -0.37
HLA-DRB4X5D2U9 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC12.74□□□□□ -0.37
HLA-DRB4X5D2U9 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
HLA-DRB4X5D2U9 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
HLA-DRB4X5D2U9 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
HLA-DRB4X5D2U9 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
HLA-DRB4X5D2U9 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
HLA-DRB4X5D2U9 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
HLA-DRB4X5D2U9 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
HLA-DRB4X5D2U9 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
HLA-DRB4X5D2U9 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC12.73□□□□□ -0.37
HLA-DRB4X5D2U9 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
HLA-DRB4X5D2U9 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
HLA-DRB4X5D2U9 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
HLA-DRB4X5D2U9 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC12.73□□□□□ -0.37
HLA-DRB4X5D2U9 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
HLA-DRB4X5D2U9 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
HLA-DRB4X5D2U9 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC12.73□□□□□ -0.37
HLA-DRB4X5D2U9 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
HLA-DRB4X5D2U9 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC12.73□□□□□ -0.37
HLA-DRB4X5D2U9 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
HLA-DRB4X5D2U9 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
HLA-DRB4X5D2U9 STK24-203ENST00000397517 4578 ntTSL 2 BASIC12.73□□□□□ -0.37
HLA-DRB4X5D2U9 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC12.73□□□□□ -0.37
HLA-DRB4X5D2U9 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC12.73□□□□□ -0.37
HLA-DRB4X5D2U9 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
HLA-DRB4X5D2U9 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
HLA-DRB4X5D2U9 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
HLA-DRB4X5D2U9 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
HLA-DRB4X5D2U9 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC12.73□□□□□ -0.37
HLA-DRB4X5D2U9 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC12.73□□□□□ -0.37
HLA-DRB4X5D2U9 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
HLA-DRB4X5D2U9 TOLLIP-AS1-201ENST00000530897 939 ntBASIC12.73□□□□□ -0.37
HLA-DRB4X5D2U9 RNF151-202ENST00000569210 853 ntTSL 2 BASIC12.73□□□□□ -0.37
HLA-DRB4X5D2U9 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
HLA-DRB4X5D2U9 AL139424.1-201ENST00000607572 797 ntBASIC12.73□□□□□ -0.37
HLA-DRB4X5D2U9 AL691432.3-201ENST00000621860 400 ntBASIC12.73□□□□□ -0.37
HLA-DRB4X5D2U9 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC12.73□□□□□ -0.37
HLA-DRB4X5D2U9 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
HLA-DRB4X5D2U9 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC12.73□□□□□ -0.37
HLA-DRB4X5D2U9 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
HLA-DRB4X5D2U9 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC12.73□□□□□ -0.37
HLA-DRB4X5D2U9 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
HLA-DRB4X5D2U9 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC12.73□□□□□ -0.37
HLA-DRB4X5D2U9 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
HLA-DRB4X5D2U9 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
HLA-DRB4X5D2U9 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
HLA-DRB4X5D2U9 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
HLA-DRB4X5D2U9 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC12.73□□□□□ -0.37
HLA-DRB4X5D2U9 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC12.73□□□□□ -0.37
HLA-DRB4X5D2U9 AL603756.1-201ENST00000606511 2163 ntBASIC12.73□□□□□ -0.37
HLA-DRB4X5D2U9 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC12.73□□□□□ -0.37
HLA-DRB4X5D2U9 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
HLA-DRB4X5D2U9 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC12.72□□□□□ -0.37
HLA-DRB4X5D2U9 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC12.72□□□□□ -0.37
HLA-DRB4X5D2U9 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
HLA-DRB4X5D2U9 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
HLA-DRB4X5D2U9 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
HLA-DRB4X5D2U9 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
HLA-DRB4X5D2U9 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC12.72□□□□□ -0.37
HLA-DRB4X5D2U9 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
HLA-DRB4X5D2U9 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
HLA-DRB4X5D2U9 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
HLA-DRB4X5D2U9 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
HLA-DRB4X5D2U9 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
HLA-DRB4X5D2U9 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
HLA-DRB4X5D2U9 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
HLA-DRB4X5D2U9 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
HLA-DRB4X5D2U9 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC12.72□□□□□ -0.37
HLA-DRB4X5D2U9 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
HLA-DRB4X5D2U9 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
HLA-DRB4X5D2U9 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
HLA-DRB4X5D2U9 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
HLA-DRB4X5D2U9 AC004870.1-201ENST00000315132 882 ntBASIC12.72□□□□□ -0.37
HLA-DRB4X5D2U9 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
HLA-DRB4X5D2U9 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
HLA-DRB4X5D2U9 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
HLA-DRB4X5D2U9 RAB17-203ENST00000409576 466 ntTSL 3 BASIC12.72□□□□□ -0.37
HLA-DRB4X5D2U9 LAGE3P1-201ENST00000425356 484 ntBASIC12.72□□□□□ -0.37
HLA-DRB4X5D2U9 AL450487.1-201ENST00000426799 995 ntBASIC12.72□□□□□ -0.37
HLA-DRB4X5D2U9 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC12.72□□□□□ -0.37
HLA-DRB4X5D2U9 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC12.72□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms