Protein–RNA interactions for Protein: Q9Y6C5

PTCH2, Protein patched homolog 2, humanhuman

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH2Q9Y6C5 AC123567.1-201ENST00000548294 1261 ntBASIC18.82■□□□□ 0.6
PTCH2Q9Y6C5 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC18.82■□□□□ 0.6
PTCH2Q9Y6C5 CYP2A7P1-201ENST00000595391 815 ntBASIC18.82■□□□□ 0.6
PTCH2Q9Y6C5 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC18.82■□□□□ 0.6
PTCH2Q9Y6C5 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PTCH2Q9Y6C5 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC18.82■□□□□ 0.6
PTCH2Q9Y6C5 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
PTCH2Q9Y6C5 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC18.82■□□□□ 0.6
PTCH2Q9Y6C5 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC18.82■□□□□ 0.6
PTCH2Q9Y6C5 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PTCH2Q9Y6C5 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC18.81■□□□□ 0.6
PTCH2Q9Y6C5 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PTCH2Q9Y6C5 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC18.81■□□□□ 0.6
PTCH2Q9Y6C5 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
PTCH2Q9Y6C5 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
PTCH2Q9Y6C5 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PTCH2Q9Y6C5 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
PTCH2Q9Y6C5 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
PTCH2Q9Y6C5 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC18.81■□□□□ 0.6
PTCH2Q9Y6C5 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC18.81■□□□□ 0.6
PTCH2Q9Y6C5 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC18.81■□□□□ 0.6
PTCH2Q9Y6C5 HLA-DPB2-205ENST00000435074 1188 ntBASIC18.81■□□□□ 0.6
PTCH2Q9Y6C5 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
PTCH2Q9Y6C5 STARD13-205ENST00000439831 945 ntTSL 2 BASIC18.81■□□□□ 0.6
PTCH2Q9Y6C5 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PTCH2Q9Y6C5 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PTCH2Q9Y6C5 TPRX2P-201ENST00000535362 881 ntBASIC18.81■□□□□ 0.6
PTCH2Q9Y6C5 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PTCH2Q9Y6C5 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC18.81■□□□□ 0.6
PTCH2Q9Y6C5 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC18.81■□□□□ 0.6
PTCH2Q9Y6C5 AC008735.3-201ENST00000596646 500 ntBASIC18.81■□□□□ 0.6
PTCH2Q9Y6C5 SRD5A3P1-201ENST00000603021 949 ntBASIC18.81■□□□□ 0.6
PTCH2Q9Y6C5 5S_rRNA.22-201ENST00000614916 106 ntBASIC18.81■□□□□ 0.6
PTCH2Q9Y6C5 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC18.81■□□□□ 0.6
PTCH2Q9Y6C5 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PTCH2Q9Y6C5 HLA-DQB1-201ENST00000374943 1656 ntBASIC18.81■□□□□ 0.6
PTCH2Q9Y6C5 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PTCH2Q9Y6C5 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC18.81■□□□□ 0.6
PTCH2Q9Y6C5 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
PTCH2Q9Y6C5 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
PTCH2Q9Y6C5 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC18.81■□□□□ 0.6
PTCH2Q9Y6C5 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PTCH2Q9Y6C5 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
PTCH2Q9Y6C5 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PTCH2Q9Y6C5 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
PTCH2Q9Y6C5 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PTCH2Q9Y6C5 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
PTCH2Q9Y6C5 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PTCH2Q9Y6C5 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PTCH2Q9Y6C5 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC18.8■□□□□ 0.6
PTCH2Q9Y6C5 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC18.8■□□□□ 0.6
PTCH2Q9Y6C5 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PTCH2Q9Y6C5 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC18.8■□□□□ 0.6
PTCH2Q9Y6C5 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC18.8■□□□□ 0.6
PTCH2Q9Y6C5 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PTCH2Q9Y6C5 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PTCH2Q9Y6C5 RPS19-201ENST00000221975 500 ntTSL 3 BASIC18.8■□□□□ 0.6
PTCH2Q9Y6C5 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC18.8■□□□□ 0.6
PTCH2Q9Y6C5 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PTCH2Q9Y6C5 MIR1908-201ENST00000410394 80 ntBASIC18.8■□□□□ 0.6
PTCH2Q9Y6C5 AC098850.1-201ENST00000419919 790 ntBASIC18.8■□□□□ 0.6
PTCH2Q9Y6C5 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC18.8■□□□□ 0.6
PTCH2Q9Y6C5 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC18.8■□□□□ 0.6
PTCH2Q9Y6C5 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC18.8■□□□□ 0.6
PTCH2Q9Y6C5 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
PTCH2Q9Y6C5 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
PTCH2Q9Y6C5 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC18.8■□□□□ 0.6
PTCH2Q9Y6C5 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PTCH2Q9Y6C5 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC18.8■□□□□ 0.6
PTCH2Q9Y6C5 MIR6869-201ENST00000619434 62 ntBASIC18.8■□□□□ 0.6
PTCH2Q9Y6C5 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PTCH2Q9Y6C5 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PTCH2Q9Y6C5 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
PTCH2Q9Y6C5 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
PTCH2Q9Y6C5 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PTCH2Q9Y6C5 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PTCH2Q9Y6C5 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PTCH2Q9Y6C5 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC18.79■□□□□ 0.6
PTCH2Q9Y6C5 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC18.79■□□□□ 0.6
PTCH2Q9Y6C5 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PTCH2Q9Y6C5 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
PTCH2Q9Y6C5 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PTCH2Q9Y6C5 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PTCH2Q9Y6C5 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PTCH2Q9Y6C5 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC18.79■□□□□ 0.6
PTCH2Q9Y6C5 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
PTCH2Q9Y6C5 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC18.79■□□□□ 0.6
PTCH2Q9Y6C5 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PTCH2Q9Y6C5 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PTCH2Q9Y6C5 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC18.79■□□□□ 0.6
PTCH2Q9Y6C5 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PTCH2Q9Y6C5 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC18.79■□□□□ 0.6
PTCH2Q9Y6C5 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC18.79■□□□□ 0.6
PTCH2Q9Y6C5 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
PTCH2Q9Y6C5 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PTCH2Q9Y6C5 RNA5SP410-201ENST00000516285 106 ntBASIC18.79■□□□□ 0.6
PTCH2Q9Y6C5 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC18.79■□□□□ 0.6
PTCH2Q9Y6C5 CD74-212ENST00000524315 584 ntTSL 5 BASIC18.79■□□□□ 0.6
PTCH2Q9Y6C5 AC023310.3-201ENST00000557027 670 ntBASIC18.79■□□□□ 0.6
PTCH2Q9Y6C5 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms