Protein–RNA interactions for Protein: Q9Y5R8

TRAPPC1, Trafficking protein particle complex subunit 1, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1Q9Y5R8 AL645728.1-201ENST00000366221 2101 ntBASIC12.79□□□□□ -0.36
TRAPPC1Q9Y5R8 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
TRAPPC1Q9Y5R8 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
TRAPPC1Q9Y5R8 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC12.79□□□□□ -0.36
TRAPPC1Q9Y5R8 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TRAPPC1Q9Y5R8 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
TRAPPC1Q9Y5R8 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
TRAPPC1Q9Y5R8 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TRAPPC1Q9Y5R8 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
TRAPPC1Q9Y5R8 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TRAPPC1Q9Y5R8 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
TRAPPC1Q9Y5R8 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
TRAPPC1Q9Y5R8 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
TRAPPC1Q9Y5R8 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
TRAPPC1Q9Y5R8 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TRAPPC1Q9Y5R8 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC12.78□□□□□ -0.36
TRAPPC1Q9Y5R8 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC12.78□□□□□ -0.36
TRAPPC1Q9Y5R8 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC12.78□□□□□ -0.36
TRAPPC1Q9Y5R8 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
TRAPPC1Q9Y5R8 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC12.78□□□□□ -0.36
TRAPPC1Q9Y5R8 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TRAPPC1Q9Y5R8 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
TRAPPC1Q9Y5R8 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC12.78□□□□□ -0.36
TRAPPC1Q9Y5R8 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
TRAPPC1Q9Y5R8 WARS-232ENST00000556645 2508 ntTSL 5 BASIC12.78□□□□□ -0.36
TRAPPC1Q9Y5R8 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TRAPPC1Q9Y5R8 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
TRAPPC1Q9Y5R8 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
TRAPPC1Q9Y5R8 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
TRAPPC1Q9Y5R8 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC12.78□□□□□ -0.36
TRAPPC1Q9Y5R8 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC12.78□□□□□ -0.36
TRAPPC1Q9Y5R8 AC008687.5-201ENST00000593746 558 ntBASIC12.78□□□□□ -0.36
TRAPPC1Q9Y5R8 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC12.78□□□□□ -0.36
TRAPPC1Q9Y5R8 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC12.78□□□□□ -0.36
TRAPPC1Q9Y5R8 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TRAPPC1Q9Y5R8 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC12.78□□□□□ -0.36
TRAPPC1Q9Y5R8 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
TRAPPC1Q9Y5R8 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TRAPPC1Q9Y5R8 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC12.78□□□□□ -0.36
TRAPPC1Q9Y5R8 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC12.78□□□□□ -0.36
TRAPPC1Q9Y5R8 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TRAPPC1Q9Y5R8 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TRAPPC1Q9Y5R8 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TRAPPC1Q9Y5R8 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
TRAPPC1Q9Y5R8 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TRAPPC1Q9Y5R8 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
TRAPPC1Q9Y5R8 GCK-202ENST00000345378 2421 ntTSL 2 BASIC12.78□□□□□ -0.36
TRAPPC1Q9Y5R8 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
TRAPPC1Q9Y5R8 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TRAPPC1Q9Y5R8 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
TRAPPC1Q9Y5R8 POLL-217ENST00000628479 1953 ntTSL 5 BASIC12.78□□□□□ -0.36
TRAPPC1Q9Y5R8 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
TRAPPC1Q9Y5R8 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
TRAPPC1Q9Y5R8 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
TRAPPC1Q9Y5R8 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TRAPPC1Q9Y5R8 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
TRAPPC1Q9Y5R8 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
TRAPPC1Q9Y5R8 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
TRAPPC1Q9Y5R8 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
TRAPPC1Q9Y5R8 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.36
TRAPPC1Q9Y5R8 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC12.77□□□□□ -0.36
TRAPPC1Q9Y5R8 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
TRAPPC1Q9Y5R8 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
TRAPPC1Q9Y5R8 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
TRAPPC1Q9Y5R8 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
TRAPPC1Q9Y5R8 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC12.77□□□□□ -0.36
TRAPPC1Q9Y5R8 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
TRAPPC1Q9Y5R8 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
TRAPPC1Q9Y5R8 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
TRAPPC1Q9Y5R8 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
TRAPPC1Q9Y5R8 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
TRAPPC1Q9Y5R8 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
TRAPPC1Q9Y5R8 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
TRAPPC1Q9Y5R8 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC12.77□□□□□ -0.36
TRAPPC1Q9Y5R8 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
TRAPPC1Q9Y5R8 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
TRAPPC1Q9Y5R8 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
TRAPPC1Q9Y5R8 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.37
TRAPPC1Q9Y5R8 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC12.77□□□□□ -0.37
TRAPPC1Q9Y5R8 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC12.77□□□□□ -0.37
TRAPPC1Q9Y5R8 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
TRAPPC1Q9Y5R8 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
TRAPPC1Q9Y5R8 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
TRAPPC1Q9Y5R8 AC016769.1-201ENST00000409132 1010 ntBASIC12.77□□□□□ -0.37
TRAPPC1Q9Y5R8 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
TRAPPC1Q9Y5R8 AC004980.1-204ENST00000429707 299 ntBASIC12.77□□□□□ -0.37
TRAPPC1Q9Y5R8 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC12.77□□□□□ -0.37
TRAPPC1Q9Y5R8 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC12.77□□□□□ -0.37
TRAPPC1Q9Y5R8 VPS53-216ENST00000574029 585 ntTSL 4 BASIC12.77□□□□□ -0.37
TRAPPC1Q9Y5R8 AC008687.6-201ENST00000596318 630 ntBASIC12.77□□□□□ -0.37
TRAPPC1Q9Y5R8 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC12.77□□□□□ -0.37
TRAPPC1Q9Y5R8 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC12.77□□□□□ -0.37
TRAPPC1Q9Y5R8 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC12.77□□□□□ -0.37
TRAPPC1Q9Y5R8 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC12.77□□□□□ -0.37
TRAPPC1Q9Y5R8 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC12.77□□□□□ -0.37
TRAPPC1Q9Y5R8 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
TRAPPC1Q9Y5R8 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC12.77□□□□□ -0.37
TRAPPC1Q9Y5R8 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
TRAPPC1Q9Y5R8 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
TRAPPC1Q9Y5R8 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms