Protein–RNA interactions for Protein: Q9Y5G7

PCDHGA6, Protocadherin gamma-A6, humanhuman

Predictions only

Length 932 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6Q9Y5G7 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC16.27■□□□□ 0.2
PCDHGA6Q9Y5G7 POLD4-207ENST00000531239 584 ntTSL 2 BASIC16.27■□□□□ 0.2
PCDHGA6Q9Y5G7 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PCDHGA6Q9Y5G7 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC16.27■□□□□ 0.2
PCDHGA6Q9Y5G7 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
PCDHGA6Q9Y5G7 AC010507.1-201ENST00000633895 436 ntBASIC16.27■□□□□ 0.2
PCDHGA6Q9Y5G7 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PCDHGA6Q9Y5G7 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PCDHGA6Q9Y5G7 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC16.27■□□□□ 0.2
PCDHGA6Q9Y5G7 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC16.27■□□□□ 0.2
PCDHGA6Q9Y5G7 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC16.27■□□□□ 0.2
PCDHGA6Q9Y5G7 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.2
PCDHGA6Q9Y5G7 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
PCDHGA6Q9Y5G7 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
PCDHGA6Q9Y5G7 OS9-205ENST00000413095 1660 ntTSL 2 BASIC16.27■□□□□ 0.19
PCDHGA6Q9Y5G7 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC16.27■□□□□ 0.19
PCDHGA6Q9Y5G7 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
PCDHGA6Q9Y5G7 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.19
PCDHGA6Q9Y5G7 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.19
PCDHGA6Q9Y5G7 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC16.27■□□□□ 0.19
PCDHGA6Q9Y5G7 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
PCDHGA6Q9Y5G7 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PCDHGA6Q9Y5G7 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
PCDHGA6Q9Y5G7 AC060834.1-201ENST00000443027 2032 ntBASIC16.26■□□□□ 0.19
PCDHGA6Q9Y5G7 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PCDHGA6Q9Y5G7 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
PCDHGA6Q9Y5G7 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC16.26■□□□□ 0.19
PCDHGA6Q9Y5G7 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC16.26■□□□□ 0.19
PCDHGA6Q9Y5G7 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC16.26■□□□□ 0.19
PCDHGA6Q9Y5G7 CA12-203ENST00000422263 2556 ntTSL 2 BASIC16.26■□□□□ 0.19
PCDHGA6Q9Y5G7 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PCDHGA6Q9Y5G7 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PCDHGA6Q9Y5G7 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
PCDHGA6Q9Y5G7 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PCDHGA6Q9Y5G7 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PCDHGA6Q9Y5G7 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC16.26■□□□□ 0.19
PCDHGA6Q9Y5G7 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC16.26■□□□□ 0.19
PCDHGA6Q9Y5G7 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PCDHGA6Q9Y5G7 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC16.26■□□□□ 0.19
PCDHGA6Q9Y5G7 OR7E47P-204ENST00000575924 449 ntBASIC16.26■□□□□ 0.19
PCDHGA6Q9Y5G7 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC16.26■□□□□ 0.19
PCDHGA6Q9Y5G7 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC16.26■□□□□ 0.19
PCDHGA6Q9Y5G7 AQP6-205ENST00000618286 829 ntTSL 5 BASIC16.26■□□□□ 0.19
PCDHGA6Q9Y5G7 AC004877.2-201ENST00000623941 599 ntBASIC16.26■□□□□ 0.19
PCDHGA6Q9Y5G7 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
PCDHGA6Q9Y5G7 PC-214ENST00000628663 1470 ntTSL 5 BASIC16.26■□□□□ 0.19
PCDHGA6Q9Y5G7 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
PCDHGA6Q9Y5G7 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PCDHGA6Q9Y5G7 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC16.26■□□□□ 0.19
PCDHGA6Q9Y5G7 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PCDHGA6Q9Y5G7 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC16.26■□□□□ 0.19
PCDHGA6Q9Y5G7 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
PCDHGA6Q9Y5G7 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC16.25■□□□□ 0.19
PCDHGA6Q9Y5G7 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PCDHGA6Q9Y5G7 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC16.25■□□□□ 0.19
PCDHGA6Q9Y5G7 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PCDHGA6Q9Y5G7 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
PCDHGA6Q9Y5G7 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC16.25■□□□□ 0.19
PCDHGA6Q9Y5G7 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
PCDHGA6Q9Y5G7 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PCDHGA6Q9Y5G7 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC16.25■□□□□ 0.19
PCDHGA6Q9Y5G7 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PCDHGA6Q9Y5G7 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
PCDHGA6Q9Y5G7 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PCDHGA6Q9Y5G7 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
PCDHGA6Q9Y5G7 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
PCDHGA6Q9Y5G7 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PCDHGA6Q9Y5G7 ACTG1P14-201ENST00000446382 1122 ntBASIC16.25■□□□□ 0.19
PCDHGA6Q9Y5G7 SMN2-210ENST00000511812 867 ntTSL 2 BASIC16.25■□□□□ 0.19
PCDHGA6Q9Y5G7 KRT19P2-202ENST00000557173 1012 ntBASIC16.25■□□□□ 0.19
PCDHGA6Q9Y5G7 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC16.25■□□□□ 0.19
PCDHGA6Q9Y5G7 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC16.25■□□□□ 0.19
PCDHGA6Q9Y5G7 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PCDHGA6Q9Y5G7 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PCDHGA6Q9Y5G7 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PCDHGA6Q9Y5G7 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PCDHGA6Q9Y5G7 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC16.25■□□□□ 0.19
PCDHGA6Q9Y5G7 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PCDHGA6Q9Y5G7 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PCDHGA6Q9Y5G7 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PCDHGA6Q9Y5G7 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC16.25■□□□□ 0.19
PCDHGA6Q9Y5G7 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PCDHGA6Q9Y5G7 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
PCDHGA6Q9Y5G7 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
PCDHGA6Q9Y5G7 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
PCDHGA6Q9Y5G7 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PCDHGA6Q9Y5G7 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC16.24■□□□□ 0.19
PCDHGA6Q9Y5G7 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PCDHGA6Q9Y5G7 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC16.24■□□□□ 0.19
PCDHGA6Q9Y5G7 FLJ38576-201ENST00000623820 2459 ntBASIC16.24■□□□□ 0.19
PCDHGA6Q9Y5G7 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
PCDHGA6Q9Y5G7 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC16.24■□□□□ 0.19
PCDHGA6Q9Y5G7 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
PCDHGA6Q9Y5G7 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
PCDHGA6Q9Y5G7 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
PCDHGA6Q9Y5G7 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PCDHGA6Q9Y5G7 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
PCDHGA6Q9Y5G7 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PCDHGA6Q9Y5G7 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PCDHGA6Q9Y5G7 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC16.24■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms