Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
PCDHB1Q9Y5F3 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PCDHB1Q9Y5F3 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC16.84■□□□□ 0.29
PCDHB1Q9Y5F3 KRT8P49-201ENST00000604166 1432 ntBASIC16.84■□□□□ 0.29
PCDHB1Q9Y5F3 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
PCDHB1Q9Y5F3 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
PCDHB1Q9Y5F3 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PCDHB1Q9Y5F3 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC16.84■□□□□ 0.29
PCDHB1Q9Y5F3 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC16.84■□□□□ 0.29
PCDHB1Q9Y5F3 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PCDHB1Q9Y5F3 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PCDHB1Q9Y5F3 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
PCDHB1Q9Y5F3 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PCDHB1Q9Y5F3 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PCDHB1Q9Y5F3 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
PCDHB1Q9Y5F3 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PCDHB1Q9Y5F3 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PCDHB1Q9Y5F3 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC16.83■□□□□ 0.28
PCDHB1Q9Y5F3 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PCDHB1Q9Y5F3 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PCDHB1Q9Y5F3 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PCDHB1Q9Y5F3 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PCDHB1Q9Y5F3 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PCDHB1Q9Y5F3 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PCDHB1Q9Y5F3 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PCDHB1Q9Y5F3 OS9-205ENST00000413095 1660 ntTSL 2 BASIC16.83■□□□□ 0.28
PCDHB1Q9Y5F3 AL645939.2-201ENST00000427340 991 ntBASIC16.83■□□□□ 0.28
PCDHB1Q9Y5F3 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PCDHB1Q9Y5F3 CEND1P1-201ENST00000451006 455 ntBASIC16.83■□□□□ 0.28
PCDHB1Q9Y5F3 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC16.83■□□□□ 0.28
PCDHB1Q9Y5F3 RPS15P9-201ENST00000494093 319 ntBASIC16.83■□□□□ 0.28
PCDHB1Q9Y5F3 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC16.83■□□□□ 0.28
PCDHB1Q9Y5F3 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC16.83■□□□□ 0.28
PCDHB1Q9Y5F3 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC16.83■□□□□ 0.28
PCDHB1Q9Y5F3 AP002472.1-201ENST00000577490 586 ntBASIC16.83■□□□□ 0.28
PCDHB1Q9Y5F3 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC16.83■□□□□ 0.28
PCDHB1Q9Y5F3 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC16.83■□□□□ 0.28
PCDHB1Q9Y5F3 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC16.83■□□□□ 0.28
PCDHB1Q9Y5F3 AC004790.2-201ENST00000623588 572 ntBASIC16.83■□□□□ 0.28
PCDHB1Q9Y5F3 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC16.83■□□□□ 0.28
PCDHB1Q9Y5F3 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PCDHB1Q9Y5F3 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
PCDHB1Q9Y5F3 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC16.83■□□□□ 0.28
PCDHB1Q9Y5F3 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
PCDHB1Q9Y5F3 PCDHB17P-201ENST00000539533 2393 ntBASIC16.82■□□□□ 0.28
PCDHB1Q9Y5F3 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC16.82■□□□□ 0.28
PCDHB1Q9Y5F3 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PCDHB1Q9Y5F3 ELL2P1-201ENST00000413990 1906 ntBASIC16.82■□□□□ 0.28
PCDHB1Q9Y5F3 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PCDHB1Q9Y5F3 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
PCDHB1Q9Y5F3 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC16.82■□□□□ 0.28
PCDHB1Q9Y5F3 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC16.82■□□□□ 0.28
PCDHB1Q9Y5F3 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC16.82■□□□□ 0.28
PCDHB1Q9Y5F3 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCDHB1Q9Y5F3 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
PCDHB1Q9Y5F3 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PCDHB1Q9Y5F3 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC16.82■□□□□ 0.28
PCDHB1Q9Y5F3 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCDHB1Q9Y5F3 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCDHB1Q9Y5F3 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PCDHB1Q9Y5F3 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCDHB1Q9Y5F3 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PCDHB1Q9Y5F3 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCDHB1Q9Y5F3 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC16.82■□□□□ 0.28
PCDHB1Q9Y5F3 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC16.82■□□□□ 0.28
PCDHB1Q9Y5F3 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PCDHB1Q9Y5F3 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC16.82■□□□□ 0.28
PCDHB1Q9Y5F3 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC16.82■□□□□ 0.28
PCDHB1Q9Y5F3 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PCDHB1Q9Y5F3 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC16.82■□□□□ 0.28
PCDHB1Q9Y5F3 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC16.82■□□□□ 0.28
PCDHB1Q9Y5F3 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
PCDHB1Q9Y5F3 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC16.82■□□□□ 0.28
PCDHB1Q9Y5F3 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC16.82■□□□□ 0.28
PCDHB1Q9Y5F3 IGHV3-65-201ENST00000523210 341 ntBASIC16.82■□□□□ 0.28
PCDHB1Q9Y5F3 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
PCDHB1Q9Y5F3 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCDHB1Q9Y5F3 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC16.82■□□□□ 0.28
PCDHB1Q9Y5F3 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC16.82■□□□□ 0.28
PCDHB1Q9Y5F3 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCDHB1Q9Y5F3 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC16.82■□□□□ 0.28
PCDHB1Q9Y5F3 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCDHB1Q9Y5F3 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCDHB1Q9Y5F3 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC16.82■□□□□ 0.28
PCDHB1Q9Y5F3 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCDHB1Q9Y5F3 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
PCDHB1Q9Y5F3 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCDHB1Q9Y5F3 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCDHB1Q9Y5F3 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC16.82■□□□□ 0.28
PCDHB1Q9Y5F3 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PCDHB1Q9Y5F3 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCDHB1Q9Y5F3 PI4KAP1-204ENST00000612579 1703 ntBASIC16.82■□□□□ 0.28
PCDHB1Q9Y5F3 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHB1Q9Y5F3 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHB1Q9Y5F3 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHB1Q9Y5F3 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC16.81■□□□□ 0.28
PCDHB1Q9Y5F3 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHB1Q9Y5F3 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHB1Q9Y5F3 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHB1Q9Y5F3 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms