Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
PCDHB11Q9Y5F2 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
PCDHB11Q9Y5F2 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
PCDHB11Q9Y5F2 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
PCDHB11Q9Y5F2 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
PCDHB11Q9Y5F2 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
PCDHB11Q9Y5F2 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC16.51■□□□□ 0.23
PCDHB11Q9Y5F2 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PCDHB11Q9Y5F2 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PCDHB11Q9Y5F2 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PCDHB11Q9Y5F2 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
PCDHB11Q9Y5F2 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
PCDHB11Q9Y5F2 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
PCDHB11Q9Y5F2 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PCDHB11Q9Y5F2 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PCDHB11Q9Y5F2 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PCDHB11Q9Y5F2 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PCDHB11Q9Y5F2 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC16.51■□□□□ 0.23
PCDHB11Q9Y5F2 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC16.51■□□□□ 0.23
PCDHB11Q9Y5F2 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC16.51■□□□□ 0.23
PCDHB11Q9Y5F2 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
PCDHB11Q9Y5F2 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC16.51■□□□□ 0.23
PCDHB11Q9Y5F2 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PCDHB11Q9Y5F2 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PCDHB11Q9Y5F2 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PCDHB11Q9Y5F2 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC16.51■□□□□ 0.23
PCDHB11Q9Y5F2 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PCDHB11Q9Y5F2 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PCDHB11Q9Y5F2 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
PCDHB11Q9Y5F2 DDT-204ENST00000404092 805 ntTSL 3 BASIC16.51■□□□□ 0.23
PCDHB11Q9Y5F2 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
PCDHB11Q9Y5F2 PAWRP1-201ENST00000451083 565 ntBASIC16.51■□□□□ 0.23
PCDHB11Q9Y5F2 SMN2-210ENST00000511812 867 ntTSL 2 BASIC16.51■□□□□ 0.23
PCDHB11Q9Y5F2 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC16.51■□□□□ 0.23
PCDHB11Q9Y5F2 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC16.51■□□□□ 0.23
PCDHB11Q9Y5F2 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC16.51■□□□□ 0.23
PCDHB11Q9Y5F2 AL078644.1-201ENST00000609881 752 ntBASIC16.51■□□□□ 0.23
PCDHB11Q9Y5F2 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC16.51■□□□□ 0.23
PCDHB11Q9Y5F2 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PCDHB11Q9Y5F2 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PCDHB11Q9Y5F2 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
PCDHB11Q9Y5F2 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PCDHB11Q9Y5F2 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
PCDHB11Q9Y5F2 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC16.51■□□□□ 0.23
PCDHB11Q9Y5F2 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC16.51■□□□□ 0.23
PCDHB11Q9Y5F2 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PCDHB11Q9Y5F2 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PCDHB11Q9Y5F2 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
PCDHB11Q9Y5F2 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PCDHB11Q9Y5F2 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
PCDHB11Q9Y5F2 FRMD8P1-201ENST00000440433 1524 ntBASIC16.5■□□□□ 0.23
PCDHB11Q9Y5F2 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
PCDHB11Q9Y5F2 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PCDHB11Q9Y5F2 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PCDHB11Q9Y5F2 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PCDHB11Q9Y5F2 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PCDHB11Q9Y5F2 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PCDHB11Q9Y5F2 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
PCDHB11Q9Y5F2 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC16.5■□□□□ 0.23
PCDHB11Q9Y5F2 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC16.5■□□□□ 0.23
PCDHB11Q9Y5F2 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC16.5■□□□□ 0.23
PCDHB11Q9Y5F2 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC16.5■□□□□ 0.23
PCDHB11Q9Y5F2 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC16.5■□□□□ 0.23
PCDHB11Q9Y5F2 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC16.5■□□□□ 0.23
PCDHB11Q9Y5F2 AC092364.2-202ENST00000597012 1073 ntBASIC16.5■□□□□ 0.23
PCDHB11Q9Y5F2 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC16.5■□□□□ 0.23
PCDHB11Q9Y5F2 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC16.5■□□□□ 0.23
PCDHB11Q9Y5F2 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC16.5■□□□□ 0.23
PCDHB11Q9Y5F2 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC16.5■□□□□ 0.23
PCDHB11Q9Y5F2 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC16.5■□□□□ 0.23
PCDHB11Q9Y5F2 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
PCDHB11Q9Y5F2 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PCDHB11Q9Y5F2 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PCDHB11Q9Y5F2 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PCDHB11Q9Y5F2 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PCDHB11Q9Y5F2 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
PCDHB11Q9Y5F2 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PCDHB11Q9Y5F2 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PCDHB11Q9Y5F2 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC16.49■□□□□ 0.23
PCDHB11Q9Y5F2 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PCDHB11Q9Y5F2 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PCDHB11Q9Y5F2 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PCDHB11Q9Y5F2 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PCDHB11Q9Y5F2 NEK7-201ENST00000367383 586 ntTSL 2 BASIC16.49■□□□□ 0.23
PCDHB11Q9Y5F2 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PCDHB11Q9Y5F2 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
PCDHB11Q9Y5F2 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PCDHB11Q9Y5F2 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
PCDHB11Q9Y5F2 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
PCDHB11Q9Y5F2 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC16.49■□□□□ 0.23
PCDHB11Q9Y5F2 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC16.49■□□□□ 0.23
PCDHB11Q9Y5F2 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC16.49■□□□□ 0.23
PCDHB11Q9Y5F2 STX3-203ENST00000529177 1571 ntTSL 2 BASIC16.49■□□□□ 0.23
PCDHB11Q9Y5F2 RIN3-211ENST00000557762 517 ntTSL 3 BASIC16.49■□□□□ 0.23
PCDHB11Q9Y5F2 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC16.49■□□□□ 0.23
PCDHB11Q9Y5F2 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC16.49■□□□□ 0.23
PCDHB11Q9Y5F2 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC16.49■□□□□ 0.23
PCDHB11Q9Y5F2 AC011467.4-201ENST00000594891 528 ntBASIC16.49■□□□□ 0.23
PCDHB11Q9Y5F2 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
PCDHB11Q9Y5F2 ORC5-208ENST00000626700 344 ntTSL 3 BASIC16.49■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms