Protein–RNA interactions for Protein: Q9Y3T6

R3HCC1, R3H and coiled-coil domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1Q9Y3T6 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
R3HCC1Q9Y3T6 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC19.36■□□□□ 0.69
R3HCC1Q9Y3T6 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC19.36■□□□□ 0.69
R3HCC1Q9Y3T6 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC19.36■□□□□ 0.69
R3HCC1Q9Y3T6 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC19.36■□□□□ 0.69
R3HCC1Q9Y3T6 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC19.36■□□□□ 0.69
R3HCC1Q9Y3T6 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
R3HCC1Q9Y3T6 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
R3HCC1Q9Y3T6 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
R3HCC1Q9Y3T6 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
R3HCC1Q9Y3T6 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
R3HCC1Q9Y3T6 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
R3HCC1Q9Y3T6 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC19.36■□□□□ 0.69
R3HCC1Q9Y3T6 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC19.36■□□□□ 0.69
R3HCC1Q9Y3T6 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC19.36■□□□□ 0.69
R3HCC1Q9Y3T6 AC246785.2-201ENST00000432512 513 ntBASIC19.36■□□□□ 0.69
R3HCC1Q9Y3T6 MINOS1P3-201ENST00000457048 203 ntBASIC19.36■□□□□ 0.69
R3HCC1Q9Y3T6 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC19.36■□□□□ 0.69
R3HCC1Q9Y3T6 AC112698.1-201ENST00000510299 916 ntBASIC19.36■□□□□ 0.69
R3HCC1Q9Y3T6 TPSP2-201ENST00000561760 610 ntBASIC19.36■□□□□ 0.69
R3HCC1Q9Y3T6 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
R3HCC1Q9Y3T6 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
R3HCC1Q9Y3T6 AC116407.2-201ENST00000613639 860 ntBASIC19.36■□□□□ 0.69
R3HCC1Q9Y3T6 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
R3HCC1Q9Y3T6 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC19.36■□□□□ 0.69
R3HCC1Q9Y3T6 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
R3HCC1Q9Y3T6 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC19.36■□□□□ 0.69
R3HCC1Q9Y3T6 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC19.36■□□□□ 0.69
R3HCC1Q9Y3T6 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
R3HCC1Q9Y3T6 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC19.36■□□□□ 0.69
R3HCC1Q9Y3T6 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
R3HCC1Q9Y3T6 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
R3HCC1Q9Y3T6 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
R3HCC1Q9Y3T6 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
R3HCC1Q9Y3T6 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
R3HCC1Q9Y3T6 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
R3HCC1Q9Y3T6 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
R3HCC1Q9Y3T6 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC19.35■□□□□ 0.69
R3HCC1Q9Y3T6 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC19.35■□□□□ 0.69
R3HCC1Q9Y3T6 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
R3HCC1Q9Y3T6 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC19.35■□□□□ 0.69
R3HCC1Q9Y3T6 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
R3HCC1Q9Y3T6 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
R3HCC1Q9Y3T6 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC19.35■□□□□ 0.69
R3HCC1Q9Y3T6 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
R3HCC1Q9Y3T6 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
R3HCC1Q9Y3T6 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC19.35■□□□□ 0.69
R3HCC1Q9Y3T6 KRT18P56-201ENST00000507275 550 ntBASIC19.35■□□□□ 0.69
R3HCC1Q9Y3T6 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC19.35■□□□□ 0.69
R3HCC1Q9Y3T6 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC19.35■□□□□ 0.69
R3HCC1Q9Y3T6 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC19.35■□□□□ 0.69
R3HCC1Q9Y3T6 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
R3HCC1Q9Y3T6 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC19.35■□□□□ 0.69
R3HCC1Q9Y3T6 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
R3HCC1Q9Y3T6 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC19.35■□□□□ 0.69
R3HCC1Q9Y3T6 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC19.35■□□□□ 0.69
R3HCC1Q9Y3T6 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
R3HCC1Q9Y3T6 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
R3HCC1Q9Y3T6 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
R3HCC1Q9Y3T6 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
R3HCC1Q9Y3T6 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC19.35■□□□□ 0.69
R3HCC1Q9Y3T6 AC099063.4-201ENST00000641099 1602 ntBASIC19.35■□□□□ 0.69
R3HCC1Q9Y3T6 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
R3HCC1Q9Y3T6 AC092364.2-201ENST00000596710 2692 ntBASIC19.35■□□□□ 0.69
R3HCC1Q9Y3T6 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
R3HCC1Q9Y3T6 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC19.35■□□□□ 0.69
R3HCC1Q9Y3T6 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
R3HCC1Q9Y3T6 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
R3HCC1Q9Y3T6 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC19.35■□□□□ 0.69
R3HCC1Q9Y3T6 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC19.35■□□□□ 0.69
R3HCC1Q9Y3T6 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC19.34■□□□□ 0.69
R3HCC1Q9Y3T6 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC19.34■□□□□ 0.69
R3HCC1Q9Y3T6 AC233702.3-201ENST00000578656 1387 ntBASIC19.34■□□□□ 0.69
R3HCC1Q9Y3T6 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
R3HCC1Q9Y3T6 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
R3HCC1Q9Y3T6 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
R3HCC1Q9Y3T6 AC116353.5-201ENST00000638148 1699 ntBASIC19.34■□□□□ 0.69
R3HCC1Q9Y3T6 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
R3HCC1Q9Y3T6 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC19.34■□□□□ 0.69
R3HCC1Q9Y3T6 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC19.34■□□□□ 0.69
R3HCC1Q9Y3T6 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
R3HCC1Q9Y3T6 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
R3HCC1Q9Y3T6 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
R3HCC1Q9Y3T6 PPIH-202ENST00000372549 327 ntTSL 3 BASIC19.34■□□□□ 0.69
R3HCC1Q9Y3T6 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
R3HCC1Q9Y3T6 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
R3HCC1Q9Y3T6 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC19.34■□□□□ 0.69
R3HCC1Q9Y3T6 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
R3HCC1Q9Y3T6 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
R3HCC1Q9Y3T6 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC19.34■□□□□ 0.69
R3HCC1Q9Y3T6 AC074051.2-201ENST00000565115 352 ntBASIC19.34■□□□□ 0.69
R3HCC1Q9Y3T6 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC19.34■□□□□ 0.69
R3HCC1Q9Y3T6 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC19.34■□□□□ 0.69
R3HCC1Q9Y3T6 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC19.34■□□□□ 0.69
R3HCC1Q9Y3T6 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
R3HCC1Q9Y3T6 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC19.34■□□□□ 0.69
R3HCC1Q9Y3T6 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
R3HCC1Q9Y3T6 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
R3HCC1Q9Y3T6 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
R3HCC1Q9Y3T6 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms