Protein–RNA interactions for Protein: Q9Y2Y8

PRG3, Proteoglycan 3, humanhuman

Predicted RBP Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRG3Q9Y2Y8 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PRG3Q9Y2Y8 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PRG3Q9Y2Y8 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC17.95■□□□□ 0.46
PRG3Q9Y2Y8 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PRG3Q9Y2Y8 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
PRG3Q9Y2Y8 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PRG3Q9Y2Y8 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC17.94■□□□□ 0.46
PRG3Q9Y2Y8 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC17.94■□□□□ 0.46
PRG3Q9Y2Y8 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
PRG3Q9Y2Y8 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PRG3Q9Y2Y8 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PRG3Q9Y2Y8 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC17.94■□□□□ 0.46
PRG3Q9Y2Y8 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
PRG3Q9Y2Y8 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC17.94■□□□□ 0.46
PRG3Q9Y2Y8 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC17.94■□□□□ 0.46
PRG3Q9Y2Y8 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PRG3Q9Y2Y8 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
PRG3Q9Y2Y8 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC17.94■□□□□ 0.46
PRG3Q9Y2Y8 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC17.94■□□□□ 0.46
PRG3Q9Y2Y8 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC17.94■□□□□ 0.46
PRG3Q9Y2Y8 AC055876.3-201ENST00000431496 288 ntBASIC17.94■□□□□ 0.46
PRG3Q9Y2Y8 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC17.94■□□□□ 0.46
PRG3Q9Y2Y8 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC17.94■□□□□ 0.46
PRG3Q9Y2Y8 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
PRG3Q9Y2Y8 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PRG3Q9Y2Y8 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
PRG3Q9Y2Y8 MIR4745-201ENST00000577608 62 ntBASIC17.94■□□□□ 0.46
PRG3Q9Y2Y8 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC17.94■□□□□ 0.46
PRG3Q9Y2Y8 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PRG3Q9Y2Y8 AC138649.4-201ENST00000612222 287 ntBASIC17.94■□□□□ 0.46
PRG3Q9Y2Y8 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC17.94■□□□□ 0.46
PRG3Q9Y2Y8 AC084121.4-201ENST00000641598 221 ntBASIC17.94■□□□□ 0.46
PRG3Q9Y2Y8 AF228730.8-201ENST00000642140 221 ntBASIC17.94■□□□□ 0.46
PRG3Q9Y2Y8 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC17.94■□□□□ 0.46
PRG3Q9Y2Y8 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
PRG3Q9Y2Y8 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PRG3Q9Y2Y8 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
PRG3Q9Y2Y8 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC17.94■□□□□ 0.46
PRG3Q9Y2Y8 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
PRG3Q9Y2Y8 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PRG3Q9Y2Y8 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC17.94■□□□□ 0.46
PRG3Q9Y2Y8 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PRG3Q9Y2Y8 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC17.94■□□□□ 0.46
PRG3Q9Y2Y8 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC17.93■□□□□ 0.46
PRG3Q9Y2Y8 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
PRG3Q9Y2Y8 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PRG3Q9Y2Y8 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC17.93■□□□□ 0.46
PRG3Q9Y2Y8 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
PRG3Q9Y2Y8 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC17.93■□□□□ 0.46
PRG3Q9Y2Y8 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
PRG3Q9Y2Y8 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PRG3Q9Y2Y8 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC17.93■□□□□ 0.46
PRG3Q9Y2Y8 BAD-202ENST00000394531 631 ntTSL 3 BASIC17.93■□□□□ 0.46
PRG3Q9Y2Y8 WRB-204ENST00000398753 699 ntTSL 3 BASIC17.93■□□□□ 0.46
PRG3Q9Y2Y8 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
PRG3Q9Y2Y8 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC17.93■□□□□ 0.46
PRG3Q9Y2Y8 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC17.93■□□□□ 0.46
PRG3Q9Y2Y8 INGX-202ENST00000489074 768 ntBASIC17.93■□□□□ 0.46
PRG3Q9Y2Y8 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC17.93■□□□□ 0.46
PRG3Q9Y2Y8 GATD1-206ENST00000526325 756 ntTSL 5 BASIC17.93■□□□□ 0.46
PRG3Q9Y2Y8 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC17.93■□□□□ 0.46
PRG3Q9Y2Y8 ALG1L8P-201ENST00000533887 760 ntBASIC17.93■□□□□ 0.46
PRG3Q9Y2Y8 BAD-207ENST00000544785 525 ntTSL 3 BASIC17.93■□□□□ 0.46
PRG3Q9Y2Y8 AQP6-203ENST00000551733 849 ntTSL 3 BASIC17.93■□□□□ 0.46
PRG3Q9Y2Y8 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC17.93■□□□□ 0.46
PRG3Q9Y2Y8 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC17.93■□□□□ 0.46
PRG3Q9Y2Y8 GREM1-201ENST00000560677 623 ntTSL 4 BASIC17.93■□□□□ 0.46
PRG3Q9Y2Y8 SSH2-211ENST00000590153 570 ntTSL 4 BASIC17.93■□□□□ 0.46
PRG3Q9Y2Y8 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC17.93■□□□□ 0.46
PRG3Q9Y2Y8 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
PRG3Q9Y2Y8 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
PRG3Q9Y2Y8 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
PRG3Q9Y2Y8 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC17.93■□□□□ 0.46
PRG3Q9Y2Y8 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
PRG3Q9Y2Y8 AC108860.2-201ENST00000562760 2183 ntBASIC17.93■□□□□ 0.46
PRG3Q9Y2Y8 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC17.93■□□□□ 0.46
PRG3Q9Y2Y8 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
PRG3Q9Y2Y8 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PRG3Q9Y2Y8 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
PRG3Q9Y2Y8 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
PRG3Q9Y2Y8 PP12613-201ENST00000424958 2230 ntBASIC17.92■□□□□ 0.46
PRG3Q9Y2Y8 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
PRG3Q9Y2Y8 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
PRG3Q9Y2Y8 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PRG3Q9Y2Y8 FO538757.1-201ENST00000623083 1397 ntBASIC17.92■□□□□ 0.46
PRG3Q9Y2Y8 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PRG3Q9Y2Y8 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
PRG3Q9Y2Y8 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
PRG3Q9Y2Y8 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
PRG3Q9Y2Y8 SPDYE7P-202ENST00000420373 878 ntBASIC17.92■□□□□ 0.46
PRG3Q9Y2Y8 TREML5P-201ENST00000421694 576 ntBASIC17.92■□□□□ 0.46
PRG3Q9Y2Y8 BASP1P1-201ENST00000430708 665 ntBASIC17.92■□□□□ 0.46
PRG3Q9Y2Y8 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC17.92■□□□□ 0.46
PRG3Q9Y2Y8 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC17.92■□□□□ 0.46
PRG3Q9Y2Y8 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC17.92■□□□□ 0.46
PRG3Q9Y2Y8 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC17.92■□□□□ 0.46
PRG3Q9Y2Y8 RNA5SP421-201ENST00000516864 134 ntBASIC17.92■□□□□ 0.46
PRG3Q9Y2Y8 IGHV3-42-201ENST00000520410 361 ntBASIC17.92■□□□□ 0.46
PRG3Q9Y2Y8 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
PRG3Q9Y2Y8 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms