Protein–RNA interactions for Protein: Q9UK58

CCNL1, Cyclin-L1, humanhuman

Predicted RBP Predictions only

Length 526 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1Q9UK58 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCNL1Q9UK58 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
CCNL1Q9UK58 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
CCNL1Q9UK58 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCNL1Q9UK58 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC21.16■□□□□ 0.98
CCNL1Q9UK58 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CCNL1Q9UK58 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCNL1Q9UK58 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCNL1Q9UK58 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CCNL1Q9UK58 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCNL1Q9UK58 MEP1AP4-201ENST00000423244 1087 ntBASIC21.16■□□□□ 0.98
CCNL1Q9UK58 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CCNL1Q9UK58 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC21.16■□□□□ 0.98
CCNL1Q9UK58 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC21.16■□□□□ 0.98
CCNL1Q9UK58 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CCNL1Q9UK58 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC21.16■□□□□ 0.98
CCNL1Q9UK58 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC21.16■□□□□ 0.98
CCNL1Q9UK58 SIGLEC29P-201ENST00000599873 1114 ntBASIC21.16■□□□□ 0.98
CCNL1Q9UK58 FHL2-212ENST00000607522 759 ntTSL 2 BASIC21.16■□□□□ 0.98
CCNL1Q9UK58 AL033527.5-202ENST00000641632 1098 ntBASIC21.16■□□□□ 0.98
CCNL1Q9UK58 PXK-206ENST00000463280 2825 ntTSL 2 BASIC21.16■□□□□ 0.98
CCNL1Q9UK58 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
CCNL1Q9UK58 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC21.16■□□□□ 0.98
CCNL1Q9UK58 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCNL1Q9UK58 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC21.16■□□□□ 0.98
CCNL1Q9UK58 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCNL1Q9UK58 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
CCNL1Q9UK58 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC21.15■□□□□ 0.98
CCNL1Q9UK58 BX323043.1-201ENST00000641006 1765 ntBASIC21.15■□□□□ 0.98
CCNL1Q9UK58 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCNL1Q9UK58 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC21.15■□□□□ 0.98
CCNL1Q9UK58 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC21.15■□□□□ 0.98
CCNL1Q9UK58 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
CCNL1Q9UK58 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC21.15■□□□□ 0.98
CCNL1Q9UK58 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCNL1Q9UK58 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCNL1Q9UK58 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CCNL1Q9UK58 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
CCNL1Q9UK58 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCNL1Q9UK58 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CCNL1Q9UK58 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCNL1Q9UK58 AC098850.1-201ENST00000419919 790 ntBASIC21.15■□□□□ 0.98
CCNL1Q9UK58 AL589987.1-201ENST00000453380 819 ntBASIC21.15■□□□□ 0.98
CCNL1Q9UK58 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCNL1Q9UK58 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
CCNL1Q9UK58 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC21.15■□□□□ 0.98
CCNL1Q9UK58 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC21.15■□□□□ 0.98
CCNL1Q9UK58 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
CCNL1Q9UK58 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC21.15■□□□□ 0.98
CCNL1Q9UK58 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CCNL1Q9UK58 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC21.15■□□□□ 0.98
CCNL1Q9UK58 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC21.15■□□□□ 0.98
CCNL1Q9UK58 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC21.15■□□□□ 0.98
CCNL1Q9UK58 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
CCNL1Q9UK58 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
CCNL1Q9UK58 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCNL1Q9UK58 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCNL1Q9UK58 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCNL1Q9UK58 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CCNL1Q9UK58 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
CCNL1Q9UK58 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
CCNL1Q9UK58 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
CCNL1Q9UK58 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
CCNL1Q9UK58 AC016396.2-201ENST00000562575 1417 ntBASIC21.14■□□□□ 0.98
CCNL1Q9UK58 RPF1-202ENST00000370656 724 ntTSL 2 BASIC21.14■□□□□ 0.97
CCNL1Q9UK58 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CCNL1Q9UK58 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC21.14■□□□□ 0.97
CCNL1Q9UK58 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC21.14■□□□□ 0.97
CCNL1Q9UK58 FAM8A2P-201ENST00000528813 1142 ntBASIC21.14■□□□□ 0.97
CCNL1Q9UK58 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC21.14■□□□□ 0.97
CCNL1Q9UK58 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC21.14■□□□□ 0.97
CCNL1Q9UK58 NAA38-207ENST00000576861 556 ntTSL 3 BASIC21.14■□□□□ 0.97
CCNL1Q9UK58 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC21.14■□□□□ 0.97
CCNL1Q9UK58 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CCNL1Q9UK58 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC21.14■□□□□ 0.97
CCNL1Q9UK58 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC21.14■□□□□ 0.97
CCNL1Q9UK58 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CCNL1Q9UK58 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
CCNL1Q9UK58 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC21.14■□□□□ 0.97
CCNL1Q9UK58 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC21.14■□□□□ 0.97
CCNL1Q9UK58 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CCNL1Q9UK58 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC21.14■□□□□ 0.97
CCNL1Q9UK58 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CCNL1Q9UK58 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
CCNL1Q9UK58 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CCNL1Q9UK58 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC21.13■□□□□ 0.97
CCNL1Q9UK58 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC21.13■□□□□ 0.97
CCNL1Q9UK58 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
CCNL1Q9UK58 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC21.13■□□□□ 0.97
CCNL1Q9UK58 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CCNL1Q9UK58 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC21.13■□□□□ 0.97
CCNL1Q9UK58 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC21.13■□□□□ 0.97
CCNL1Q9UK58 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CCNL1Q9UK58 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CCNL1Q9UK58 AC007389.4-201ENST00000454674 793 ntBASIC21.13■□□□□ 0.97
CCNL1Q9UK58 SDHAP3-202ENST00000515467 728 ntBASIC21.13■□□□□ 0.97
CCNL1Q9UK58 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CCNL1Q9UK58 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC21.13■□□□□ 0.97
CCNL1Q9UK58 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC21.13■□□□□ 0.97
CCNL1Q9UK58 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms