Protein–RNA interactions for Protein: Q9NPC8

SIX2, Homeobox protein SIX2, humanhuman

Predictions only

Length 291 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX2Q9NPC8 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SIX2Q9NPC8 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
SIX2Q9NPC8 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC18.03■□□□□ 0.48
SIX2Q9NPC8 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
SIX2Q9NPC8 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC18.03■□□□□ 0.48
SIX2Q9NPC8 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SIX2Q9NPC8 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC18.03■□□□□ 0.48
SIX2Q9NPC8 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC18.03■□□□□ 0.48
SIX2Q9NPC8 MRPL20P1-201ENST00000400819 433 ntBASIC18.03■□□□□ 0.48
SIX2Q9NPC8 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SIX2Q9NPC8 FAAHP1-202ENST00000446499 1238 ntBASIC18.03■□□□□ 0.48
SIX2Q9NPC8 AC092910.1-201ENST00000482027 1129 ntBASIC18.03■□□□□ 0.48
SIX2Q9NPC8 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC18.03■□□□□ 0.48
SIX2Q9NPC8 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC18.03■□□□□ 0.48
SIX2Q9NPC8 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC18.03■□□□□ 0.48
SIX2Q9NPC8 AC087641.1-201ENST00000557561 1021 ntBASIC18.03■□□□□ 0.48
SIX2Q9NPC8 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
SIX2Q9NPC8 AC005593.1-201ENST00000624894 515 ntBASIC18.03■□□□□ 0.48
SIX2Q9NPC8 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
SIX2Q9NPC8 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC18.03■□□□□ 0.48
SIX2Q9NPC8 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC18.03■□□□□ 0.48
SIX2Q9NPC8 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC18.03■□□□□ 0.48
SIX2Q9NPC8 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SIX2Q9NPC8 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SIX2Q9NPC8 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC18.03■□□□□ 0.48
SIX2Q9NPC8 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
SIX2Q9NPC8 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SIX2Q9NPC8 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC18.03■□□□□ 0.48
SIX2Q9NPC8 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SIX2Q9NPC8 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
SIX2Q9NPC8 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC18.02■□□□□ 0.48
SIX2Q9NPC8 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
SIX2Q9NPC8 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
SIX2Q9NPC8 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SIX2Q9NPC8 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC18.02■□□□□ 0.48
SIX2Q9NPC8 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SIX2Q9NPC8 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
SIX2Q9NPC8 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
SIX2Q9NPC8 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
SIX2Q9NPC8 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC18.02■□□□□ 0.48
SIX2Q9NPC8 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC18.02■□□□□ 0.48
SIX2Q9NPC8 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SIX2Q9NPC8 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SIX2Q9NPC8 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC18.02■□□□□ 0.48
SIX2Q9NPC8 AL031284.1-201ENST00000419297 478 ntBASIC18.02■□□□□ 0.48
SIX2Q9NPC8 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC18.02■□□□□ 0.48
SIX2Q9NPC8 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
SIX2Q9NPC8 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
SIX2Q9NPC8 KRT126P-201ENST00000549467 1181 ntBASIC18.02■□□□□ 0.48
SIX2Q9NPC8 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC18.02■□□□□ 0.48
SIX2Q9NPC8 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SIX2Q9NPC8 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC18.02■□□□□ 0.48
SIX2Q9NPC8 AL773604.1-201ENST00000617417 272 ntBASIC18.02■□□□□ 0.48
SIX2Q9NPC8 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
SIX2Q9NPC8 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
SIX2Q9NPC8 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
SIX2Q9NPC8 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
SIX2Q9NPC8 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
SIX2Q9NPC8 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC18.02■□□□□ 0.47
SIX2Q9NPC8 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC18.02■□□□□ 0.47
SIX2Q9NPC8 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC18.02■□□□□ 0.47
SIX2Q9NPC8 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC18.02■□□□□ 0.47
SIX2Q9NPC8 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
SIX2Q9NPC8 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
SIX2Q9NPC8 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SIX2Q9NPC8 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SIX2Q9NPC8 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC18.01■□□□□ 0.47
SIX2Q9NPC8 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
SIX2Q9NPC8 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
SIX2Q9NPC8 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SIX2Q9NPC8 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
SIX2Q9NPC8 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC18.01■□□□□ 0.47
SIX2Q9NPC8 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC18.01■□□□□ 0.47
SIX2Q9NPC8 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
SIX2Q9NPC8 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SIX2Q9NPC8 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
SIX2Q9NPC8 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SIX2Q9NPC8 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SIX2Q9NPC8 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
SIX2Q9NPC8 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SIX2Q9NPC8 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC18.01■□□□□ 0.47
SIX2Q9NPC8 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC18.01■□□□□ 0.47
SIX2Q9NPC8 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
SIX2Q9NPC8 CSF3-203ENST00000394148 622 ntTSL 3 BASIC18.01■□□□□ 0.47
SIX2Q9NPC8 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SIX2Q9NPC8 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
SIX2Q9NPC8 AC098831.1-202ENST00000438821 336 ntBASIC18.01■□□□□ 0.47
SIX2Q9NPC8 FAM185BP-201ENST00000443595 716 ntBASIC18.01■□□□□ 0.47
SIX2Q9NPC8 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
SIX2Q9NPC8 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC18.01■□□□□ 0.47
SIX2Q9NPC8 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC18.01■□□□□ 0.47
SIX2Q9NPC8 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC18.01■□□□□ 0.47
SIX2Q9NPC8 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC18.01■□□□□ 0.47
SIX2Q9NPC8 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
SIX2Q9NPC8 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
SIX2Q9NPC8 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC18.01■□□□□ 0.47
SIX2Q9NPC8 GPAA1P2-202ENST00000606848 1787 ntBASIC18.01■□□□□ 0.47
SIX2Q9NPC8 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC18.01■□□□□ 0.47
SIX2Q9NPC8 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC18.01■□□□□ 0.47
SIX2Q9NPC8 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms