Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC18.7■□□□□ 0.58
VTA1Q9NP79 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
VTA1Q9NP79 METTL26-204ENST00000397665 558 ntTSL 2 BASIC18.7■□□□□ 0.58
VTA1Q9NP79 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
VTA1Q9NP79 AL353705.2-201ENST00000428243 662 ntBASIC18.7■□□□□ 0.58
VTA1Q9NP79 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC18.7■□□□□ 0.58
VTA1Q9NP79 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
VTA1Q9NP79 SATB1-217ENST00000493952 626 ntTSL 3 BASIC18.7■□□□□ 0.58
VTA1Q9NP79 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC18.7■□□□□ 0.58
VTA1Q9NP79 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC18.7■□□□□ 0.58
VTA1Q9NP79 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC18.7■□□□□ 0.58
VTA1Q9NP79 RBM7-207ENST00000544582 692 ntTSL 3 BASIC18.7■□□□□ 0.58
VTA1Q9NP79 COX11-202ENST00000571584 1108 ntTSL 2 BASIC18.7■□□□□ 0.58
VTA1Q9NP79 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC18.7■□□□□ 0.58
VTA1Q9NP79 RPS15-212ENST00000593052 629 ntTSL 2 BASIC18.7■□□□□ 0.58
VTA1Q9NP79 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
VTA1Q9NP79 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
VTA1Q9NP79 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
VTA1Q9NP79 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
VTA1Q9NP79 AC092053.1-201ENST00000605787 1936 ntBASIC18.7■□□□□ 0.58
VTA1Q9NP79 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
VTA1Q9NP79 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC18.7■□□□□ 0.58
VTA1Q9NP79 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
VTA1Q9NP79 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC18.7■□□□□ 0.58
VTA1Q9NP79 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC18.69■□□□□ 0.58
VTA1Q9NP79 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
VTA1Q9NP79 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC18.69■□□□□ 0.58
VTA1Q9NP79 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
VTA1Q9NP79 NOC2LP2-201ENST00000407594 1944 ntBASIC18.69■□□□□ 0.58
VTA1Q9NP79 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
VTA1Q9NP79 KRT8P39-201ENST00000396270 1433 ntBASIC18.69■□□□□ 0.58
VTA1Q9NP79 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
VTA1Q9NP79 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
VTA1Q9NP79 GOLGA6L11P-201ENST00000417252 1298 ntBASIC18.69■□□□□ 0.58
VTA1Q9NP79 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC18.69■□□□□ 0.58
VTA1Q9NP79 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
VTA1Q9NP79 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC18.69■□□□□ 0.58
VTA1Q9NP79 AC005225.4-201ENST00000557330 545 ntBASIC18.69■□□□□ 0.58
VTA1Q9NP79 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC18.69■□□□□ 0.58
VTA1Q9NP79 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC18.69■□□□□ 0.58
VTA1Q9NP79 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC18.69■□□□□ 0.58
VTA1Q9NP79 AC012645.4-201ENST00000610691 1061 ntBASIC18.69■□□□□ 0.58
VTA1Q9NP79 AL035252.4-201ENST00000624174 288 ntBASIC18.69■□□□□ 0.58
VTA1Q9NP79 AL671710.1-201ENST00000610245 2349 ntBASIC18.69■□□□□ 0.58
VTA1Q9NP79 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
VTA1Q9NP79 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
VTA1Q9NP79 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
VTA1Q9NP79 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
VTA1Q9NP79 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC18.69■□□□□ 0.58
VTA1Q9NP79 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
VTA1Q9NP79 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
VTA1Q9NP79 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC18.69■□□□□ 0.58
VTA1Q9NP79 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
VTA1Q9NP79 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
VTA1Q9NP79 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
VTA1Q9NP79 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC18.68■□□□□ 0.58
VTA1Q9NP79 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
VTA1Q9NP79 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
VTA1Q9NP79 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
VTA1Q9NP79 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
VTA1Q9NP79 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC18.68■□□□□ 0.58
VTA1Q9NP79 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC18.68■□□□□ 0.58
VTA1Q9NP79 AC005034.1-201ENST00000426657 489 ntBASIC18.68■□□□□ 0.58
VTA1Q9NP79 AC098859.1-201ENST00000502915 1238 ntBASIC18.68■□□□□ 0.58
VTA1Q9NP79 SERBP1P5-201ENST00000510079 1181 ntBASIC18.68■□□□□ 0.58
VTA1Q9NP79 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC18.68■□□□□ 0.58
VTA1Q9NP79 AC009118.2-201ENST00000613275 655 ntBASIC18.68■□□□□ 0.58
VTA1Q9NP79 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
VTA1Q9NP79 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
VTA1Q9NP79 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC18.68■□□□□ 0.58
VTA1Q9NP79 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
VTA1Q9NP79 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
VTA1Q9NP79 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
VTA1Q9NP79 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
VTA1Q9NP79 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
VTA1Q9NP79 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
VTA1Q9NP79 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
VTA1Q9NP79 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
VTA1Q9NP79 AC022144.1-201ENST00000602255 1580 ntBASIC18.68■□□□□ 0.58
VTA1Q9NP79 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC18.67■□□□□ 0.58
VTA1Q9NP79 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
VTA1Q9NP79 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
VTA1Q9NP79 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC18.67■□□□□ 0.58
VTA1Q9NP79 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
VTA1Q9NP79 FST-202ENST00000396947 2538 ntTSL 5 BASIC18.67■□□□□ 0.58
VTA1Q9NP79 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
VTA1Q9NP79 AC067852.2-201ENST00000590513 2313 ntBASIC18.67■□□□□ 0.58
VTA1Q9NP79 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC18.67■□□□□ 0.58
VTA1Q9NP79 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC18.67■□□□□ 0.58
VTA1Q9NP79 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
VTA1Q9NP79 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
VTA1Q9NP79 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
VTA1Q9NP79 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
VTA1Q9NP79 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
VTA1Q9NP79 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
VTA1Q9NP79 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
VTA1Q9NP79 HNRNPA3P1-201ENST00000401429 1139 ntBASIC18.67■□□□□ 0.58
VTA1Q9NP79 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC18.67■□□□□ 0.58
VTA1Q9NP79 CRB3P1-201ENST00000449338 276 ntBASIC18.67■□□□□ 0.58
VTA1Q9NP79 HNRNPA3P5-201ENST00000455201 833 ntBASIC18.67■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms