Protein–RNA interactions for Protein: Q9HD20

ATP13A1, Manganese-transporting ATPase 13A1, humanhuman

Predictions only

Length 1,204 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A1Q9HD20 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ATP13A1Q9HD20 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
ATP13A1Q9HD20 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
ATP13A1Q9HD20 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
ATP13A1Q9HD20 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ATP13A1Q9HD20 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ATP13A1Q9HD20 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC17.23■□□□□ 0.35
ATP13A1Q9HD20 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
ATP13A1Q9HD20 KRT18P13-201ENST00000400056 1290 ntBASIC17.23■□□□□ 0.35
ATP13A1Q9HD20 MCCD1P2-201ENST00000423228 335 ntBASIC17.23■□□□□ 0.35
ATP13A1Q9HD20 DNAJB3-201ENST00000446806 729 ntBASIC17.23■□□□□ 0.35
ATP13A1Q9HD20 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
ATP13A1Q9HD20 RPL28-209ENST00000560055 670 ntTSL 3 BASIC17.23■□□□□ 0.35
ATP13A1Q9HD20 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC17.23■□□□□ 0.35
ATP13A1Q9HD20 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC17.23■□□□□ 0.35
ATP13A1Q9HD20 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC17.23■□□□□ 0.35
ATP13A1Q9HD20 AP001350.2-201ENST00000625104 1094 ntBASIC17.23■□□□□ 0.35
ATP13A1Q9HD20 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ATP13A1Q9HD20 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
ATP13A1Q9HD20 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC17.23■□□□□ 0.35
ATP13A1Q9HD20 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
ATP13A1Q9HD20 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC17.23■□□□□ 0.35
ATP13A1Q9HD20 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC17.23■□□□□ 0.35
ATP13A1Q9HD20 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
ATP13A1Q9HD20 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC17.23■□□□□ 0.35
ATP13A1Q9HD20 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC17.22■□□□□ 0.35
ATP13A1Q9HD20 REM2-202ENST00000536884 1331 ntTSL 2 BASIC17.22■□□□□ 0.35
ATP13A1Q9HD20 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ATP13A1Q9HD20 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
ATP13A1Q9HD20 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ATP13A1Q9HD20 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
ATP13A1Q9HD20 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
ATP13A1Q9HD20 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
ATP13A1Q9HD20 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
ATP13A1Q9HD20 AC011676.5-201ENST00000624864 2660 ntBASIC17.22■□□□□ 0.35
ATP13A1Q9HD20 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
ATP13A1Q9HD20 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
ATP13A1Q9HD20 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
ATP13A1Q9HD20 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
ATP13A1Q9HD20 FALEC-201ENST00000416894 566 ntTSL 3 BASIC17.22■□□□□ 0.35
ATP13A1Q9HD20 AC087641.1-201ENST00000557561 1021 ntBASIC17.22■□□□□ 0.35
ATP13A1Q9HD20 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC17.22■□□□□ 0.35
ATP13A1Q9HD20 AC010327.4-202ENST00000591484 748 ntBASIC17.22■□□□□ 0.35
ATP13A1Q9HD20 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC17.22■□□□□ 0.35
ATP13A1Q9HD20 AC068137.2-201ENST00000605408 478 ntBASIC17.22■□□□□ 0.35
ATP13A1Q9HD20 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
ATP13A1Q9HD20 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ATP13A1Q9HD20 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC17.22■□□□□ 0.35
ATP13A1Q9HD20 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ATP13A1Q9HD20 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC17.22■□□□□ 0.35
ATP13A1Q9HD20 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ATP13A1Q9HD20 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
ATP13A1Q9HD20 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
ATP13A1Q9HD20 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC17.22■□□□□ 0.35
ATP13A1Q9HD20 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ATP13A1Q9HD20 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
ATP13A1Q9HD20 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
ATP13A1Q9HD20 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC17.22■□□□□ 0.35
ATP13A1Q9HD20 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
ATP13A1Q9HD20 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC17.21■□□□□ 0.35
ATP13A1Q9HD20 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
ATP13A1Q9HD20 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC17.21■□□□□ 0.35
ATP13A1Q9HD20 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ATP13A1Q9HD20 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ATP13A1Q9HD20 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
ATP13A1Q9HD20 AC078925.2-201ENST00000624013 1973 ntBASIC17.21■□□□□ 0.35
ATP13A1Q9HD20 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
ATP13A1Q9HD20 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC17.21■□□□□ 0.35
ATP13A1Q9HD20 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC17.21■□□□□ 0.35
ATP13A1Q9HD20 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ATP13A1Q9HD20 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC17.21■□□□□ 0.35
ATP13A1Q9HD20 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC17.21■□□□□ 0.35
ATP13A1Q9HD20 NMU-203ENST00000507338 658 ntTSL 3 BASIC17.21■□□□□ 0.35
ATP13A1Q9HD20 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC17.21■□□□□ 0.35
ATP13A1Q9HD20 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
ATP13A1Q9HD20 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
ATP13A1Q9HD20 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC17.21■□□□□ 0.35
ATP13A1Q9HD20 WT1-AS_2.1-201ENST00000613208 137 ntBASIC17.21■□□□□ 0.35
ATP13A1Q9HD20 HOTTIP_1.1-201ENST00000620415 57 ntBASIC17.21■□□□□ 0.35
ATP13A1Q9HD20 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ATP13A1Q9HD20 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
ATP13A1Q9HD20 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC17.21■□□□□ 0.35
ATP13A1Q9HD20 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC17.2■□□□□ 0.34
ATP13A1Q9HD20 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
ATP13A1Q9HD20 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ATP13A1Q9HD20 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ATP13A1Q9HD20 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
ATP13A1Q9HD20 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC17.2■□□□□ 0.34
ATP13A1Q9HD20 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
ATP13A1Q9HD20 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC17.2■□□□□ 0.34
ATP13A1Q9HD20 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
ATP13A1Q9HD20 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ATP13A1Q9HD20 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ATP13A1Q9HD20 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
ATP13A1Q9HD20 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
ATP13A1Q9HD20 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC17.2■□□□□ 0.34
ATP13A1Q9HD20 HMGA1P7-201ENST00000406908 502 ntBASIC17.2■□□□□ 0.34
ATP13A1Q9HD20 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC17.2■□□□□ 0.34
ATP13A1Q9HD20 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC17.2■□□□□ 0.34
ATP13A1Q9HD20 MIR3687-2-201ENST00000577708 61 ntBASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms