Protein–RNA interactions for Protein: Q9H1D9

POLR3F, DNA-directed RNA polymerase III subunit RPC6, humanhuman

Predicted RBP Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR3FQ9H1D9 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
POLR3FQ9H1D9 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
POLR3FQ9H1D9 DNAJB3-202ENST00000449667 1266 ntBASIC18.49■□□□□ 0.55
POLR3FQ9H1D9 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC18.49■□□□□ 0.55
POLR3FQ9H1D9 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC18.49■□□□□ 0.55
POLR3FQ9H1D9 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
POLR3FQ9H1D9 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
POLR3FQ9H1D9 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
POLR3FQ9H1D9 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC18.49■□□□□ 0.55
POLR3FQ9H1D9 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
POLR3FQ9H1D9 SNX33P1-201ENST00000592116 1762 ntBASIC18.49■□□□□ 0.55
POLR3FQ9H1D9 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC18.49■□□□□ 0.55
POLR3FQ9H1D9 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
POLR3FQ9H1D9 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
POLR3FQ9H1D9 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
POLR3FQ9H1D9 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
POLR3FQ9H1D9 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
POLR3FQ9H1D9 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC18.48■□□□□ 0.55
POLR3FQ9H1D9 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC18.48■□□□□ 0.55
POLR3FQ9H1D9 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC18.48■□□□□ 0.55
POLR3FQ9H1D9 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC18.48■□□□□ 0.55
POLR3FQ9H1D9 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
POLR3FQ9H1D9 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
POLR3FQ9H1D9 PMS2P4-201ENST00000412466 1052 ntBASIC18.48■□□□□ 0.55
POLR3FQ9H1D9 AC092474.2-201ENST00000424288 719 ntBASIC18.48■□□□□ 0.55
POLR3FQ9H1D9 AL671277.1-201ENST00000429656 993 ntBASIC18.48■□□□□ 0.55
POLR3FQ9H1D9 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC18.48■□□□□ 0.55
POLR3FQ9H1D9 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC18.48■□□□□ 0.55
POLR3FQ9H1D9 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
POLR3FQ9H1D9 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
POLR3FQ9H1D9 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC18.48■□□□□ 0.55
POLR3FQ9H1D9 MIR3909-201ENST00000579518 119 ntBASIC18.48■□□□□ 0.55
POLR3FQ9H1D9 AP001160.2-201ENST00000596071 487 ntBASIC18.48■□□□□ 0.55
POLR3FQ9H1D9 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
POLR3FQ9H1D9 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
POLR3FQ9H1D9 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC18.48■□□□□ 0.55
POLR3FQ9H1D9 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
POLR3FQ9H1D9 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
POLR3FQ9H1D9 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
POLR3FQ9H1D9 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
POLR3FQ9H1D9 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC18.48■□□□□ 0.55
POLR3FQ9H1D9 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
POLR3FQ9H1D9 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
POLR3FQ9H1D9 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
POLR3FQ9H1D9 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
POLR3FQ9H1D9 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC18.47■□□□□ 0.55
POLR3FQ9H1D9 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
POLR3FQ9H1D9 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
POLR3FQ9H1D9 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
POLR3FQ9H1D9 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
POLR3FQ9H1D9 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
POLR3FQ9H1D9 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
POLR3FQ9H1D9 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
POLR3FQ9H1D9 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC18.47■□□□□ 0.55
POLR3FQ9H1D9 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC18.47■□□□□ 0.55
POLR3FQ9H1D9 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
POLR3FQ9H1D9 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC18.47■□□□□ 0.55
POLR3FQ9H1D9 WDR53-204ENST00000433160 887 ntTSL 5 BASIC18.47■□□□□ 0.55
POLR3FQ9H1D9 CCND1-203ENST00000536559 553 ntTSL 3 BASIC18.47■□□□□ 0.55
POLR3FQ9H1D9 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC18.47■□□□□ 0.55
POLR3FQ9H1D9 RARRES2P8-201ENST00000566335 367 ntBASIC18.47■□□□□ 0.55
POLR3FQ9H1D9 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC18.47■□□□□ 0.55
POLR3FQ9H1D9 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC18.47■□□□□ 0.55
POLR3FQ9H1D9 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC18.47■□□□□ 0.55
POLR3FQ9H1D9 AL161645.1-201ENST00000622716 1255 ntBASIC18.47■□□□□ 0.55
POLR3FQ9H1D9 AC079781.4-201ENST00000641908 219 ntBASIC18.47■□□□□ 0.55
POLR3FQ9H1D9 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
POLR3FQ9H1D9 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
POLR3FQ9H1D9 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
POLR3FQ9H1D9 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
POLR3FQ9H1D9 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC18.47■□□□□ 0.55
POLR3FQ9H1D9 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
POLR3FQ9H1D9 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
POLR3FQ9H1D9 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
POLR3FQ9H1D9 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
POLR3FQ9H1D9 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
POLR3FQ9H1D9 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
POLR3FQ9H1D9 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC18.47■□□□□ 0.55
POLR3FQ9H1D9 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
POLR3FQ9H1D9 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC18.47■□□□□ 0.55
POLR3FQ9H1D9 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
POLR3FQ9H1D9 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
POLR3FQ9H1D9 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC18.47■□□□□ 0.55
POLR3FQ9H1D9 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
POLR3FQ9H1D9 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC18.47■□□□□ 0.55
POLR3FQ9H1D9 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
POLR3FQ9H1D9 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
POLR3FQ9H1D9 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC18.46■□□□□ 0.55
POLR3FQ9H1D9 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC18.46■□□□□ 0.55
POLR3FQ9H1D9 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC18.46■□□□□ 0.55
POLR3FQ9H1D9 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
POLR3FQ9H1D9 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
POLR3FQ9H1D9 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
POLR3FQ9H1D9 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
POLR3FQ9H1D9 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
POLR3FQ9H1D9 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
POLR3FQ9H1D9 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
POLR3FQ9H1D9 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
POLR3FQ9H1D9 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
POLR3FQ9H1D9 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms