Protein–RNA interactions for Protein: Q9C0C9

UBE2O, (E3-independent) E2 ubiquitin-conjugating enzyme, humanhuman

Known RBP Predictions only

Length 1,292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2OQ9C0C9 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC18.51■□□□□ 0.55
UBE2OQ9C0C9 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC18.51■□□□□ 0.55
UBE2OQ9C0C9 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
UBE2OQ9C0C9 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC18.51■□□□□ 0.55
UBE2OQ9C0C9 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
UBE2OQ9C0C9 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
UBE2OQ9C0C9 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC18.51■□□□□ 0.55
UBE2OQ9C0C9 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC18.51■□□□□ 0.55
UBE2OQ9C0C9 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
UBE2OQ9C0C9 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
UBE2OQ9C0C9 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
UBE2OQ9C0C9 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
UBE2OQ9C0C9 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC18.5■□□□□ 0.55
UBE2OQ9C0C9 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
UBE2OQ9C0C9 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
UBE2OQ9C0C9 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
UBE2OQ9C0C9 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC18.5■□□□□ 0.55
UBE2OQ9C0C9 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
UBE2OQ9C0C9 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC18.5■□□□□ 0.55
UBE2OQ9C0C9 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
UBE2OQ9C0C9 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
UBE2OQ9C0C9 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
UBE2OQ9C0C9 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
UBE2OQ9C0C9 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
UBE2OQ9C0C9 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
UBE2OQ9C0C9 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC18.5■□□□□ 0.55
UBE2OQ9C0C9 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC18.5■□□□□ 0.55
UBE2OQ9C0C9 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
UBE2OQ9C0C9 AC018529.1-201ENST00000613063 361 ntBASIC18.5■□□□□ 0.55
UBE2OQ9C0C9 AC009949.1-201ENST00000623048 1830 ntBASIC18.5■□□□□ 0.55
UBE2OQ9C0C9 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
UBE2OQ9C0C9 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
UBE2OQ9C0C9 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC18.5■□□□□ 0.55
UBE2OQ9C0C9 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
UBE2OQ9C0C9 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC18.5■□□□□ 0.55
UBE2OQ9C0C9 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
UBE2OQ9C0C9 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
UBE2OQ9C0C9 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
UBE2OQ9C0C9 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
UBE2OQ9C0C9 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC18.5■□□□□ 0.55
UBE2OQ9C0C9 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC18.49■□□□□ 0.55
UBE2OQ9C0C9 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
UBE2OQ9C0C9 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
UBE2OQ9C0C9 AC138028.4-201ENST00000564984 1845 ntBASIC18.49■□□□□ 0.55
UBE2OQ9C0C9 HTR7P1-202ENST00000624664 4411 ntBASIC18.49■□□□□ 0.55
UBE2OQ9C0C9 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
UBE2OQ9C0C9 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
UBE2OQ9C0C9 FAM86MP-201ENST00000340703 885 ntBASIC18.49■□□□□ 0.55
UBE2OQ9C0C9 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
UBE2OQ9C0C9 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
UBE2OQ9C0C9 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
UBE2OQ9C0C9 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC18.49■□□□□ 0.55
UBE2OQ9C0C9 GALT-202ENST00000450095 1280 ntTSL 2 BASIC18.49■□□□□ 0.55
UBE2OQ9C0C9 AC009477.1-201ENST00000452936 217 ntBASIC18.49■□□□□ 0.55
UBE2OQ9C0C9 AC109635.5-201ENST00000533593 962 ntBASIC18.49■□□□□ 0.55
UBE2OQ9C0C9 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
UBE2OQ9C0C9 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC18.49■□□□□ 0.55
UBE2OQ9C0C9 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC18.49■□□□□ 0.55
UBE2OQ9C0C9 AC008738.7-201ENST00000609744 511 ntBASIC18.49■□□□□ 0.55
UBE2OQ9C0C9 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC18.49■□□□□ 0.55
UBE2OQ9C0C9 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
UBE2OQ9C0C9 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
UBE2OQ9C0C9 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC18.49■□□□□ 0.55
UBE2OQ9C0C9 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
UBE2OQ9C0C9 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
UBE2OQ9C0C9 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC18.49■□□□□ 0.55
UBE2OQ9C0C9 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
UBE2OQ9C0C9 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
UBE2OQ9C0C9 NOC2LP2-201ENST00000407594 1944 ntBASIC18.49■□□□□ 0.55
UBE2OQ9C0C9 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC18.49■□□□□ 0.55
UBE2OQ9C0C9 AC012569.1-201ENST00000591191 1524 ntBASIC18.49■□□□□ 0.55
UBE2OQ9C0C9 REXO1L6P-201ENST00000603433 1515 ntBASIC18.49■□□□□ 0.55
UBE2OQ9C0C9 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
UBE2OQ9C0C9 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC18.49■□□□□ 0.55
UBE2OQ9C0C9 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC18.49■□□□□ 0.55
UBE2OQ9C0C9 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
UBE2OQ9C0C9 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC18.49■□□□□ 0.55
UBE2OQ9C0C9 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
UBE2OQ9C0C9 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
UBE2OQ9C0C9 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
UBE2OQ9C0C9 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC18.48■□□□□ 0.55
UBE2OQ9C0C9 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC18.48■□□□□ 0.55
UBE2OQ9C0C9 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
UBE2OQ9C0C9 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC18.48■□□□□ 0.55
UBE2OQ9C0C9 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
UBE2OQ9C0C9 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC18.48■□□□□ 0.55
UBE2OQ9C0C9 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC18.48■□□□□ 0.55
UBE2OQ9C0C9 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC18.48■□□□□ 0.55
UBE2OQ9C0C9 HLA-V-204ENST00000476601 1289 ntBASIC18.48■□□□□ 0.55
UBE2OQ9C0C9 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC18.48■□□□□ 0.55
UBE2OQ9C0C9 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC18.48■□□□□ 0.55
UBE2OQ9C0C9 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
UBE2OQ9C0C9 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
UBE2OQ9C0C9 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC18.48■□□□□ 0.55
UBE2OQ9C0C9 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC18.48■□□□□ 0.55
UBE2OQ9C0C9 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
UBE2OQ9C0C9 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC18.48■□□□□ 0.55
UBE2OQ9C0C9 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
UBE2OQ9C0C9 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
UBE2OQ9C0C9 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC18.48■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms