Protein–RNA interactions for Protein: Q9C056

NKX6-2, Homeobox protein Nkx-6.2, humanhuman

Predicted RBP Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-2Q9C056 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC13.7□□□□□ -0.22
NKX6-2Q9C056 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC13.7□□□□□ -0.22
NKX6-2Q9C056 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
NKX6-2Q9C056 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC13.69□□□□□ -0.22
NKX6-2Q9C056 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC13.69□□□□□ -0.22
NKX6-2Q9C056 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC13.69□□□□□ -0.22
NKX6-2Q9C056 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
NKX6-2Q9C056 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
NKX6-2Q9C056 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC13.69□□□□□ -0.22
NKX6-2Q9C056 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
NKX6-2Q9C056 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC13.69□□□□□ -0.22
NKX6-2Q9C056 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
NKX6-2Q9C056 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
NKX6-2Q9C056 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
NKX6-2Q9C056 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC13.69□□□□□ -0.22
NKX6-2Q9C056 AL603832.2-201ENST00000566195 2125 ntBASIC13.69□□□□□ -0.22
NKX6-2Q9C056 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
NKX6-2Q9C056 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
NKX6-2Q9C056 OR2I1P-209ENST00000641730 5365 ntBASIC13.69□□□□□ -0.22
NKX6-2Q9C056 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
NKX6-2Q9C056 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
NKX6-2Q9C056 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC13.69□□□□□ -0.22
NKX6-2Q9C056 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
NKX6-2Q9C056 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
NKX6-2Q9C056 ALOX12P2-203ENST00000570921 1945 ntBASIC13.69□□□□□ -0.22
NKX6-2Q9C056 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC13.69□□□□□ -0.22
NKX6-2Q9C056 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
NKX6-2Q9C056 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
NKX6-2Q9C056 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
NKX6-2Q9C056 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
NKX6-2Q9C056 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
NKX6-2Q9C056 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
NKX6-2Q9C056 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
NKX6-2Q9C056 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC13.69□□□□□ -0.22
NKX6-2Q9C056 DDX43P3-201ENST00000441064 443 ntBASIC13.69□□□□□ -0.22
NKX6-2Q9C056 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
NKX6-2Q9C056 AC008040.2-201ENST00000461049 708 ntBASIC13.69□□□□□ -0.22
NKX6-2Q9C056 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC13.69□□□□□ -0.22
NKX6-2Q9C056 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC13.69□□□□□ -0.22
NKX6-2Q9C056 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
NKX6-2Q9C056 CR392000.1-201ENST00000624770 1228 ntBASIC13.69□□□□□ -0.22
NKX6-2Q9C056 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
NKX6-2Q9C056 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
NKX6-2Q9C056 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
NKX6-2Q9C056 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC13.69□□□□□ -0.22
NKX6-2Q9C056 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
NKX6-2Q9C056 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
NKX6-2Q9C056 CNTNAP3P2-201ENST00000617175 3861 ntBASIC13.69□□□□□ -0.22
NKX6-2Q9C056 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
NKX6-2Q9C056 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
NKX6-2Q9C056 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
NKX6-2Q9C056 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
NKX6-2Q9C056 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
NKX6-2Q9C056 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
NKX6-2Q9C056 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
NKX6-2Q9C056 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
NKX6-2Q9C056 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
NKX6-2Q9C056 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
NKX6-2Q9C056 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC13.68□□□□□ -0.22
NKX6-2Q9C056 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
NKX6-2Q9C056 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
NKX6-2Q9C056 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC13.68□□□□□ -0.22
NKX6-2Q9C056 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
NKX6-2Q9C056 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
NKX6-2Q9C056 AC010491.1-201ENST00000563101 2797 ntBASIC13.68□□□□□ -0.22
NKX6-2Q9C056 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
NKX6-2Q9C056 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
NKX6-2Q9C056 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC13.68□□□□□ -0.22
NKX6-2Q9C056 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
NKX6-2Q9C056 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
NKX6-2Q9C056 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC13.68□□□□□ -0.22
NKX6-2Q9C056 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
NKX6-2Q9C056 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC13.68□□□□□ -0.22
NKX6-2Q9C056 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC13.68□□□□□ -0.22
NKX6-2Q9C056 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
NKX6-2Q9C056 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC13.68□□□□□ -0.22
NKX6-2Q9C056 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC13.68□□□□□ -0.22
NKX6-2Q9C056 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
NKX6-2Q9C056 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
NKX6-2Q9C056 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC13.68□□□□□ -0.22
NKX6-2Q9C056 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
NKX6-2Q9C056 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC13.68□□□□□ -0.22
NKX6-2Q9C056 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
NKX6-2Q9C056 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
NKX6-2Q9C056 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
NKX6-2Q9C056 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
NKX6-2Q9C056 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
NKX6-2Q9C056 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
NKX6-2Q9C056 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
NKX6-2Q9C056 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
NKX6-2Q9C056 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC13.68□□□□□ -0.22
NKX6-2Q9C056 B3GAT3P1-201ENST00000471720 806 ntBASIC13.68□□□□□ -0.22
NKX6-2Q9C056 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC13.68□□□□□ -0.22
NKX6-2Q9C056 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC13.68□□□□□ -0.22
NKX6-2Q9C056 DLX3-202ENST00000512495 834 ntTSL 2 BASIC13.68□□□□□ -0.22
NKX6-2Q9C056 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC13.68□□□□□ -0.22
NKX6-2Q9C056 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
NKX6-2Q9C056 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
NKX6-2Q9C056 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC13.68□□□□□ -0.22
NKX6-2Q9C056 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC13.68□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 53.2 ms