Protein–RNA interactions for Protein: Q9C040

TRIM2, Tripartite motif-containing protein 2, humanhuman

Predictions only

Length 744 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM2Q9C040 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRIM2Q9C040 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRIM2Q9C040 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
TRIM2Q9C040 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC15.53■□□□□ 0.08
TRIM2Q9C040 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC15.53■□□□□ 0.08
TRIM2Q9C040 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC15.53■□□□□ 0.08
TRIM2Q9C040 AL645728.1-201ENST00000366221 2101 ntBASIC15.53■□□□□ 0.08
TRIM2Q9C040 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRIM2Q9C040 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRIM2Q9C040 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC15.53■□□□□ 0.08
TRIM2Q9C040 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRIM2Q9C040 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRIM2Q9C040 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC15.53■□□□□ 0.08
TRIM2Q9C040 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC15.53■□□□□ 0.08
TRIM2Q9C040 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRIM2Q9C040 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRIM2Q9C040 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRIM2Q9C040 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC15.53■□□□□ 0.08
TRIM2Q9C040 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC15.53■□□□□ 0.08
TRIM2Q9C040 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
TRIM2Q9C040 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC15.53■□□□□ 0.08
TRIM2Q9C040 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC15.53■□□□□ 0.08
TRIM2Q9C040 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC15.53■□□□□ 0.08
TRIM2Q9C040 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TRIM2Q9C040 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC15.53■□□□□ 0.08
TRIM2Q9C040 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC15.53■□□□□ 0.08
TRIM2Q9C040 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC15.53■□□□□ 0.08
TRIM2Q9C040 AC008608.2-201ENST00000606089 416 ntBASIC15.53■□□□□ 0.08
TRIM2Q9C040 VPS51-217ENST00000639871 243 ntTSL 5 BASIC15.53■□□□□ 0.08
TRIM2Q9C040 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC15.53■□□□□ 0.08
TRIM2Q9C040 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC15.53■□□□□ 0.08
TRIM2Q9C040 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
TRIM2Q9C040 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC15.53■□□□□ 0.08
TRIM2Q9C040 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
TRIM2Q9C040 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC15.53■□□□□ 0.08
TRIM2Q9C040 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRIM2Q9C040 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRIM2Q9C040 AL603756.1-201ENST00000606511 2163 ntBASIC15.53■□□□□ 0.08
TRIM2Q9C040 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC15.53■□□□□ 0.08
TRIM2Q9C040 LINC00895-201ENST00000629028 1637 ntBASIC15.53■□□□□ 0.08
TRIM2Q9C040 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRIM2Q9C040 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC15.53■□□□□ 0.08
TRIM2Q9C040 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TRIM2Q9C040 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRIM2Q9C040 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC15.53■□□□□ 0.08
TRIM2Q9C040 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC15.53■□□□□ 0.08
TRIM2Q9C040 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TRIM2Q9C040 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TRIM2Q9C040 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC15.52■□□□□ 0.08
TRIM2Q9C040 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
TRIM2Q9C040 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
TRIM2Q9C040 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
TRIM2Q9C040 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC15.52■□□□□ 0.08
TRIM2Q9C040 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TRIM2Q9C040 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TRIM2Q9C040 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
TRIM2Q9C040 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
TRIM2Q9C040 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
TRIM2Q9C040 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
TRIM2Q9C040 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC15.52■□□□□ 0.08
TRIM2Q9C040 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
TRIM2Q9C040 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TRIM2Q9C040 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TRIM2Q9C040 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC15.52■□□□□ 0.08
TRIM2Q9C040 FGFR3P6-201ENST00000457012 610 ntBASIC15.52■□□□□ 0.08
TRIM2Q9C040 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC15.52■□□□□ 0.08
TRIM2Q9C040 AF238378.1-201ENST00000526806 358 ntBASIC15.52■□□□□ 0.08
TRIM2Q9C040 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC15.52■□□□□ 0.08
TRIM2Q9C040 AL662844.1-201ENST00000546340 181 ntBASIC15.52■□□□□ 0.08
TRIM2Q9C040 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC15.52■□□□□ 0.08
TRIM2Q9C040 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC15.52■□□□□ 0.08
TRIM2Q9C040 SLC25A6P4-201ENST00000586535 553 ntBASIC15.52■□□□□ 0.08
TRIM2Q9C040 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC15.52■□□□□ 0.08
TRIM2Q9C040 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TRIM2Q9C040 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC15.52■□□□□ 0.07
TRIM2Q9C040 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
TRIM2Q9C040 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
TRIM2Q9C040 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
TRIM2Q9C040 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC15.52■□□□□ 0.07
TRIM2Q9C040 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
TRIM2Q9C040 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC15.52■□□□□ 0.07
TRIM2Q9C040 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC15.52■□□□□ 0.07
TRIM2Q9C040 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TRIM2Q9C040 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
TRIM2Q9C040 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRIM2Q9C040 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRIM2Q9C040 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TRIM2Q9C040 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TRIM2Q9C040 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TRIM2Q9C040 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRIM2Q9C040 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
TRIM2Q9C040 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TRIM2Q9C040 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC15.51■□□□□ 0.07
TRIM2Q9C040 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRIM2Q9C040 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRIM2Q9C040 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
TRIM2Q9C040 IRF8-202ENST00000562492 946 ntTSL 3 BASIC15.51■□□□□ 0.07
TRIM2Q9C040 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC15.51■□□□□ 0.07
TRIM2Q9C040 MTDHP4-201ENST00000600287 670 ntBASIC15.51■□□□□ 0.07
TRIM2Q9C040 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms