Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
LITAFQ99732 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
LITAFQ99732 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC11.21□□□□□ -0.61
LITAFQ99732 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
LITAFQ99732 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC11.21□□□□□ -0.61
LITAFQ99732 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC11.21□□□□□ -0.61
LITAFQ99732 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
LITAFQ99732 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC11.21□□□□□ -0.61
LITAFQ99732 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
LITAFQ99732 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
LITAFQ99732 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
LITAFQ99732 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC11.21□□□□□ -0.61
LITAFQ99732 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
LITAFQ99732 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
LITAFQ99732 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC11.21□□□□□ -0.61
LITAFQ99732 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
LITAFQ99732 CICP4-201ENST00000447359 2812 ntBASIC11.21□□□□□ -0.61
LITAFQ99732 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
LITAFQ99732 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
LITAFQ99732 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
LITAFQ99732 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
LITAFQ99732 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC11.21□□□□□ -0.61
LITAFQ99732 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC11.21□□□□□ -0.61
LITAFQ99732 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC11.21□□□□□ -0.61
LITAFQ99732 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
LITAFQ99732 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC11.21□□□□□ -0.61
LITAFQ99732 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC11.21□□□□□ -0.61
LITAFQ99732 AC013467.2-201ENST00000605472 835 ntBASIC11.21□□□□□ -0.61
LITAFQ99732 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC11.21□□□□□ -0.61
LITAFQ99732 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
LITAFQ99732 AC010653.2-201ENST00000623505 997 ntBASIC11.21□□□□□ -0.61
LITAFQ99732 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
LITAFQ99732 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
LITAFQ99732 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
LITAFQ99732 POLL-206ENST00000370172 2308 ntTSL 2 BASIC11.21□□□□□ -0.62
LITAFQ99732 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
LITAFQ99732 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.62
LITAFQ99732 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC11.21□□□□□ -0.62
LITAFQ99732 AC104581.4-201ENST00000623126 3052 ntBASIC11.21□□□□□ -0.62
LITAFQ99732 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
LITAFQ99732 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
LITAFQ99732 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC11.21□□□□□ -0.62
LITAFQ99732 REXO1L8P-201ENST00000604378 1897 ntBASIC11.21□□□□□ -0.62
LITAFQ99732 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.62
LITAFQ99732 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
LITAFQ99732 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC11.21□□□□□ -0.62
LITAFQ99732 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC11.21□□□□□ -0.62
LITAFQ99732 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC11.21□□□□□ -0.62
LITAFQ99732 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC11.21□□□□□ -0.62
LITAFQ99732 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
LITAFQ99732 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
LITAFQ99732 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.62
LITAFQ99732 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC11.21□□□□□ -0.62
LITAFQ99732 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
LITAFQ99732 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC11.2□□□□□ -0.62
LITAFQ99732 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
LITAFQ99732 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
LITAFQ99732 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
LITAFQ99732 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
LITAFQ99732 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC11.2□□□□□ -0.62
LITAFQ99732 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC11.2□□□□□ -0.62
LITAFQ99732 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
LITAFQ99732 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
LITAFQ99732 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
LITAFQ99732 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
LITAFQ99732 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
LITAFQ99732 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
LITAFQ99732 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC11.2□□□□□ -0.62
LITAFQ99732 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
LITAFQ99732 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
LITAFQ99732 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
LITAFQ99732 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC11.2□□□□□ -0.62
LITAFQ99732 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
LITAFQ99732 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
LITAFQ99732 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
LITAFQ99732 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
LITAFQ99732 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
LITAFQ99732 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
LITAFQ99732 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
LITAFQ99732 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC11.2□□□□□ -0.62
LITAFQ99732 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
LITAFQ99732 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC11.2□□□□□ -0.62
LITAFQ99732 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC11.2□□□□□ -0.62
LITAFQ99732 AC007967.3-201ENST00000434308 558 ntBASIC11.2□□□□□ -0.62
LITAFQ99732 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC11.2□□□□□ -0.62
LITAFQ99732 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
LITAFQ99732 KLF13-207ENST00000560473 489 ntTSL 3 BASIC11.2□□□□□ -0.62
LITAFQ99732 AC111152.3-201ENST00000569699 673 ntBASIC11.2□□□□□ -0.62
LITAFQ99732 NEK4P2-201ENST00000580004 1012 ntBASIC11.2□□□□□ -0.62
LITAFQ99732 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
LITAFQ99732 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC11.2□□□□□ -0.62
LITAFQ99732 ANKRD20A8P-203ENST00000641373 517 ntBASIC11.2□□□□□ -0.62
LITAFQ99732 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
LITAFQ99732 AC020658.6-201ENST00000623564 1870 ntBASIC11.2□□□□□ -0.62
LITAFQ99732 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
LITAFQ99732 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
LITAFQ99732 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC11.2□□□□□ -0.62
LITAFQ99732 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC11.2□□□□□ -0.62
LITAFQ99732 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
LITAFQ99732 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC11.2□□□□□ -0.62
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms