Protein–RNA interactions for Protein: Q99616

CCL13, C-C motif chemokine 13, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL13Q99616 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC14.12□□□□□ -0.15
CCL13Q99616 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CCL13Q99616 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC14.11□□□□□ -0.15
CCL13Q99616 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CCL13Q99616 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
CCL13Q99616 AC106886.4-201ENST00000623557 2502 ntBASIC14.11□□□□□ -0.15
CCL13Q99616 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC14.11□□□□□ -0.15
CCL13Q99616 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CCL13Q99616 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC14.11□□□□□ -0.15
CCL13Q99616 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CCL13Q99616 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC14.11□□□□□ -0.15
CCL13Q99616 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
CCL13Q99616 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CCL13Q99616 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CCL13Q99616 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CCL13Q99616 NF2-208ENST00000403435 2568 ntTSL 5 BASIC14.11□□□□□ -0.15
CCL13Q99616 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CCL13Q99616 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CCL13Q99616 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC14.11□□□□□ -0.15
CCL13Q99616 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC14.11□□□□□ -0.15
CCL13Q99616 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
CCL13Q99616 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
CCL13Q99616 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC14.11□□□□□ -0.15
CCL13Q99616 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
CCL13Q99616 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC14.11□□□□□ -0.15
CCL13Q99616 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC14.11□□□□□ -0.15
CCL13Q99616 KRT18P2-201ENST00000447938 1258 ntBASIC14.11□□□□□ -0.15
CCL13Q99616 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC14.11□□□□□ -0.15
CCL13Q99616 KRT18P3-201ENST00000451602 1288 ntBASIC14.11□□□□□ -0.15
CCL13Q99616 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC14.11□□□□□ -0.15
CCL13Q99616 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC14.11□□□□□ -0.15
CCL13Q99616 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC14.11□□□□□ -0.15
CCL13Q99616 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC14.11□□□□□ -0.15
CCL13Q99616 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CCL13Q99616 AC018845.2-201ENST00000568326 409 ntBASIC14.11□□□□□ -0.15
CCL13Q99616 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
CCL13Q99616 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC14.11□□□□□ -0.15
CCL13Q99616 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC14.11□□□□□ -0.15
CCL13Q99616 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
CCL13Q99616 HARS-204ENST00000438307 1789 ntTSL 2 BASIC14.11□□□□□ -0.15
CCL13Q99616 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CCL13Q99616 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CCL13Q99616 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
CCL13Q99616 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC14.11□□□□□ -0.15
CCL13Q99616 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CCL13Q99616 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC14.11□□□□□ -0.15
CCL13Q99616 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC14.11□□□□□ -0.15
CCL13Q99616 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC14.11□□□□□ -0.15
CCL13Q99616 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC14.1□□□□□ -0.15
CCL13Q99616 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
CCL13Q99616 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
CCL13Q99616 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CCL13Q99616 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC14.1□□□□□ -0.15
CCL13Q99616 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
CCL13Q99616 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC14.1□□□□□ -0.15
CCL13Q99616 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CCL13Q99616 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
CCL13Q99616 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC14.1□□□□□ -0.15
CCL13Q99616 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC14.1□□□□□ -0.15
CCL13Q99616 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CCL13Q99616 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CCL13Q99616 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC14.1□□□□□ -0.15
CCL13Q99616 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
CCL13Q99616 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CCL13Q99616 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CCL13Q99616 MIR574-201ENST00000385209 96 ntBASIC14.1□□□□□ -0.15
CCL13Q99616 PMS2P1-201ENST00000431037 1228 ntBASIC14.1□□□□□ -0.15
CCL13Q99616 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC14.1□□□□□ -0.15
CCL13Q99616 AL591424.1-201ENST00000442569 1213 ntBASIC14.1□□□□□ -0.15
CCL13Q99616 AL513480.1-201ENST00000451731 511 ntBASIC14.1□□□□□ -0.15
CCL13Q99616 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC14.1□□□□□ -0.15
CCL13Q99616 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
CCL13Q99616 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC14.1□□□□□ -0.15
CCL13Q99616 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC14.1□□□□□ -0.15
CCL13Q99616 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CCL13Q99616 POLD2P1-201ENST00000511220 997 ntBASIC14.1□□□□□ -0.15
CCL13Q99616 RNA5SP416-201ENST00000516838 111 ntBASIC14.1□□□□□ -0.15
CCL13Q99616 MAL2-202ENST00000531508 892 ntTSL 3 BASIC14.1□□□□□ -0.15
CCL13Q99616 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC14.1□□□□□ -0.15
CCL13Q99616 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC14.1□□□□□ -0.15
CCL13Q99616 ACTL9-202ENST00000612068 1252 ntBASIC14.1□□□□□ -0.15
CCL13Q99616 BSG-214ENST00000614867 960 ntTSL 3 BASIC14.1□□□□□ -0.15
CCL13Q99616 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CCL13Q99616 AC010507.1-201ENST00000633895 436 ntBASIC14.1□□□□□ -0.15
CCL13Q99616 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CCL13Q99616 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC14.1□□□□□ -0.15
CCL13Q99616 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CCL13Q99616 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CCL13Q99616 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CCL13Q99616 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC14.1□□□□□ -0.15
CCL13Q99616 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC14.1□□□□□ -0.15
CCL13Q99616 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CCL13Q99616 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CCL13Q99616 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
CCL13Q99616 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
CCL13Q99616 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC14.1□□□□□ -0.15
CCL13Q99616 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
CCL13Q99616 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CCL13Q99616 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CCL13Q99616 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms