Protein–RNA interactions for Protein: Q99603

TRGV9, T-cell receptor gamma variable 9 (Fragment), humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV9Q99603 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC13.16□□□□□ -0.3
TRGV9Q99603 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
TRGV9Q99603 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRGV9Q99603 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC13.16□□□□□ -0.3
TRGV9Q99603 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
TRGV9Q99603 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC13.16□□□□□ -0.3
TRGV9Q99603 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC13.16□□□□□ -0.3
TRGV9Q99603 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRGV9Q99603 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRGV9Q99603 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
TRGV9Q99603 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
TRGV9Q99603 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
TRGV9Q99603 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
TRGV9Q99603 RBSN-204ENST00000449050 903 ntTSL 2 BASIC13.16□□□□□ -0.3
TRGV9Q99603 PRYP5-201ENST00000451909 266 ntBASIC13.16□□□□□ -0.3
TRGV9Q99603 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
TRGV9Q99603 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC13.16□□□□□ -0.3
TRGV9Q99603 MPI-205ENST00000562606 1052 ntTSL 3 BASIC13.16□□□□□ -0.3
TRGV9Q99603 CYB561-217ENST00000582997 877 ntTSL 5 BASIC13.16□□□□□ -0.3
TRGV9Q99603 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
TRGV9Q99603 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC13.16□□□□□ -0.3
TRGV9Q99603 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRGV9Q99603 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
TRGV9Q99603 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRGV9Q99603 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRGV9Q99603 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRGV9Q99603 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRGV9Q99603 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
TRGV9Q99603 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRGV9Q99603 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRGV9Q99603 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC13.16□□□□□ -0.3
TRGV9Q99603 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRGV9Q99603 LINC02199-201ENST00000506655 2702 ntBASIC13.16□□□□□ -0.3
TRGV9Q99603 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC13.16□□□□□ -0.3
TRGV9Q99603 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRGV9Q99603 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
TRGV9Q99603 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRGV9Q99603 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC13.16□□□□□ -0.3
TRGV9Q99603 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRGV9Q99603 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
TRGV9Q99603 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRGV9Q99603 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC13.16□□□□□ -0.3
TRGV9Q99603 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TRGV9Q99603 GCK-202ENST00000345378 2421 ntTSL 2 BASIC13.15□□□□□ -0.3
TRGV9Q99603 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC13.15□□□□□ -0.3
TRGV9Q99603 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TRGV9Q99603 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
TRGV9Q99603 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
TRGV9Q99603 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
TRGV9Q99603 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
TRGV9Q99603 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC13.15□□□□□ -0.3
TRGV9Q99603 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
TRGV9Q99603 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TRGV9Q99603 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC13.15□□□□□ -0.3
TRGV9Q99603 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TRGV9Q99603 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TRGV9Q99603 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
TRGV9Q99603 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
TRGV9Q99603 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TRGV9Q99603 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
TRGV9Q99603 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC13.15□□□□□ -0.3
TRGV9Q99603 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
TRGV9Q99603 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC13.15□□□□□ -0.3
TRGV9Q99603 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC13.15□□□□□ -0.3
TRGV9Q99603 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TRGV9Q99603 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TRGV9Q99603 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC13.15□□□□□ -0.3
TRGV9Q99603 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TRGV9Q99603 PCED1CP-201ENST00000419887 785 ntBASIC13.15□□□□□ -0.3
TRGV9Q99603 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC13.15□□□□□ -0.3
TRGV9Q99603 NME3-204ENST00000563498 920 ntTSL 2 BASIC13.15□□□□□ -0.3
TRGV9Q99603 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
TRGV9Q99603 AC012615.1-201ENST00000565797 1299 ntBASIC13.15□□□□□ -0.3
TRGV9Q99603 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC13.15□□□□□ -0.3
TRGV9Q99603 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC13.15□□□□□ -0.3
TRGV9Q99603 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC13.15□□□□□ -0.3
TRGV9Q99603 CCNC-219ENST00000627680 896 ntTSL 5 BASIC13.15□□□□□ -0.3
TRGV9Q99603 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC13.15□□□□□ -0.3
TRGV9Q99603 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TRGV9Q99603 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
TRGV9Q99603 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TRGV9Q99603 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
TRGV9Q99603 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
TRGV9Q99603 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
TRGV9Q99603 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
TRGV9Q99603 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC13.15□□□□□ -0.3
TRGV9Q99603 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.31
TRGV9Q99603 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC13.15□□□□□ -0.31
TRGV9Q99603 AL162727.3-201ENST00000635661 2787 ntBASIC13.15□□□□□ -0.31
TRGV9Q99603 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
TRGV9Q99603 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC13.14□□□□□ -0.31
TRGV9Q99603 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
TRGV9Q99603 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
TRGV9Q99603 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
TRGV9Q99603 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
TRGV9Q99603 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
TRGV9Q99603 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
TRGV9Q99603 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
TRGV9Q99603 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC13.14□□□□□ -0.31
TRGV9Q99603 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 62.5 ms