Protein–RNA interactions for Protein: Q96RK4

BBS4, Bardet-Biedl syndrome 4 protein, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4Q96RK4 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
BBS4Q96RK4 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
BBS4Q96RK4 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC15.99■□□□□ 0.15
BBS4Q96RK4 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
BBS4Q96RK4 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
BBS4Q96RK4 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
BBS4Q96RK4 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
BBS4Q96RK4 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
BBS4Q96RK4 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC15.99■□□□□ 0.15
BBS4Q96RK4 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC15.99■□□□□ 0.15
BBS4Q96RK4 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC15.99■□□□□ 0.15
BBS4Q96RK4 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
BBS4Q96RK4 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
BBS4Q96RK4 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
BBS4Q96RK4 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC15.99■□□□□ 0.15
BBS4Q96RK4 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC15.99■□□□□ 0.15
BBS4Q96RK4 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
BBS4Q96RK4 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC15.99■□□□□ 0.15
BBS4Q96RK4 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC15.99■□□□□ 0.15
BBS4Q96RK4 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
BBS4Q96RK4 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
BBS4Q96RK4 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
BBS4Q96RK4 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
BBS4Q96RK4 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
BBS4Q96RK4 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC15.99■□□□□ 0.15
BBS4Q96RK4 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC15.99■□□□□ 0.15
BBS4Q96RK4 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
BBS4Q96RK4 ELK2BP-201ENST00000415014 1224 ntBASIC15.99■□□□□ 0.15
BBS4Q96RK4 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC15.99■□□□□ 0.15
BBS4Q96RK4 FAM197Y8-203ENST00000450145 560 ntBASIC15.99■□□□□ 0.15
BBS4Q96RK4 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC15.99■□□□□ 0.15
BBS4Q96RK4 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC15.99■□□□□ 0.15
BBS4Q96RK4 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
BBS4Q96RK4 DUX4L17-201ENST00000557360 1267 ntBASIC15.99■□□□□ 0.15
BBS4Q96RK4 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC15.99■□□□□ 0.15
BBS4Q96RK4 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
BBS4Q96RK4 AL121912.1-201ENST00000603683 238 ntBASIC15.99■□□□□ 0.15
BBS4Q96RK4 AF228730.7-201ENST00000641842 219 ntBASIC15.99■□□□□ 0.15
BBS4Q96RK4 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
BBS4Q96RK4 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
BBS4Q96RK4 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC15.99■□□□□ 0.15
BBS4Q96RK4 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
BBS4Q96RK4 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
BBS4Q96RK4 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
BBS4Q96RK4 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC15.99■□□□□ 0.15
BBS4Q96RK4 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
BBS4Q96RK4 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
BBS4Q96RK4 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
BBS4Q96RK4 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
BBS4Q96RK4 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
BBS4Q96RK4 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC15.98■□□□□ 0.15
BBS4Q96RK4 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC15.98■□□□□ 0.15
BBS4Q96RK4 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
BBS4Q96RK4 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
BBS4Q96RK4 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC15.98■□□□□ 0.15
BBS4Q96RK4 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
BBS4Q96RK4 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
BBS4Q96RK4 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
BBS4Q96RK4 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC15.98■□□□□ 0.15
BBS4Q96RK4 INIP-202ENST00000374236 874 ntTSL 2 BASIC15.98■□□□□ 0.15
BBS4Q96RK4 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
BBS4Q96RK4 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
BBS4Q96RK4 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC15.98■□□□□ 0.15
BBS4Q96RK4 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC15.98■□□□□ 0.15
BBS4Q96RK4 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
BBS4Q96RK4 AL391256.1-201ENST00000443260 1855 ntBASIC15.98■□□□□ 0.15
BBS4Q96RK4 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC15.98■□□□□ 0.15
BBS4Q96RK4 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC15.98■□□□□ 0.15
BBS4Q96RK4 AF186996.4-201ENST00000467186 377 ntBASIC15.98■□□□□ 0.15
BBS4Q96RK4 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC15.98■□□□□ 0.15
BBS4Q96RK4 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
BBS4Q96RK4 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC15.98■□□□□ 0.15
BBS4Q96RK4 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC15.98■□□□□ 0.15
BBS4Q96RK4 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC15.98■□□□□ 0.15
BBS4Q96RK4 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC15.98■□□□□ 0.15
BBS4Q96RK4 AC079328.2-201ENST00000561241 3354 ntBASIC15.98■□□□□ 0.15
BBS4Q96RK4 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
BBS4Q96RK4 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
BBS4Q96RK4 AL805961.1-202ENST00000641562 540 ntBASIC15.98■□□□□ 0.15
BBS4Q96RK4 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC15.98■□□□□ 0.15
BBS4Q96RK4 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC15.98■□□□□ 0.15
BBS4Q96RK4 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
BBS4Q96RK4 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
BBS4Q96RK4 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
BBS4Q96RK4 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
BBS4Q96RK4 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC15.98■□□□□ 0.15
BBS4Q96RK4 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC15.98■□□□□ 0.15
BBS4Q96RK4 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
BBS4Q96RK4 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
BBS4Q96RK4 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC15.98■□□□□ 0.15
BBS4Q96RK4 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC15.98■□□□□ 0.15
BBS4Q96RK4 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC15.98■□□□□ 0.15
BBS4Q96RK4 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
BBS4Q96RK4 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC15.97■□□□□ 0.15
BBS4Q96RK4 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
BBS4Q96RK4 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC15.97■□□□□ 0.15
BBS4Q96RK4 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
BBS4Q96RK4 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC15.97■□□□□ 0.15
BBS4Q96RK4 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
BBS4Q96RK4 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms