Protein–RNA interactions for Protein: Q96MD7

C9orf85, Uncharacterized protein C9orf85, humanhuman

Predictions only

Length 179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf85Q96MD7 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
C9orf85Q96MD7 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC12.23□□□□□ -0.45
C9orf85Q96MD7 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC12.23□□□□□ -0.45
C9orf85Q96MD7 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC12.23□□□□□ -0.45
C9orf85Q96MD7 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
C9orf85Q96MD7 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
C9orf85Q96MD7 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
C9orf85Q96MD7 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC12.23□□□□□ -0.45
C9orf85Q96MD7 GGT3P-204ENST00000453783 1664 ntBASIC12.22□□□□□ -0.45
C9orf85Q96MD7 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC12.22□□□□□ -0.45
C9orf85Q96MD7 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
C9orf85Q96MD7 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC12.22□□□□□ -0.45
C9orf85Q96MD7 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
C9orf85Q96MD7 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC12.22□□□□□ -0.45
C9orf85Q96MD7 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC12.22□□□□□ -0.45
C9orf85Q96MD7 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC12.22□□□□□ -0.45
C9orf85Q96MD7 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC12.22□□□□□ -0.45
C9orf85Q96MD7 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
C9orf85Q96MD7 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
C9orf85Q96MD7 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC12.22□□□□□ -0.45
C9orf85Q96MD7 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
C9orf85Q96MD7 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
C9orf85Q96MD7 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC12.22□□□□□ -0.45
C9orf85Q96MD7 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
C9orf85Q96MD7 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
C9orf85Q96MD7 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC12.22□□□□□ -0.45
C9orf85Q96MD7 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
C9orf85Q96MD7 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
C9orf85Q96MD7 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
C9orf85Q96MD7 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
C9orf85Q96MD7 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
C9orf85Q96MD7 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC12.22□□□□□ -0.45
C9orf85Q96MD7 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC12.22□□□□□ -0.45
C9orf85Q96MD7 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
C9orf85Q96MD7 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC12.22□□□□□ -0.45
C9orf85Q96MD7 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC12.22□□□□□ -0.45
C9orf85Q96MD7 BX005266.1-201ENST00000473402 457 ntBASIC12.22□□□□□ -0.45
C9orf85Q96MD7 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC12.22□□□□□ -0.45
C9orf85Q96MD7 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC12.22□□□□□ -0.45
C9orf85Q96MD7 AC106795.1-205ENST00000512851 1056 ntBASIC12.22□□□□□ -0.45
C9orf85Q96MD7 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
C9orf85Q96MD7 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC12.22□□□□□ -0.45
C9orf85Q96MD7 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC12.22□□□□□ -0.45
C9orf85Q96MD7 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC12.22□□□□□ -0.45
C9orf85Q96MD7 AL139424.1-201ENST00000607572 797 ntBASIC12.22□□□□□ -0.45
C9orf85Q96MD7 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
C9orf85Q96MD7 AL139288.1-201ENST00000623748 933 ntBASIC12.22□□□□□ -0.45
C9orf85Q96MD7 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
C9orf85Q96MD7 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC12.22□□□□□ -0.45
C9orf85Q96MD7 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
C9orf85Q96MD7 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
C9orf85Q96MD7 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
C9orf85Q96MD7 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC12.22□□□□□ -0.45
C9orf85Q96MD7 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
C9orf85Q96MD7 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC12.22□□□□□ -0.45
C9orf85Q96MD7 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
C9orf85Q96MD7 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC12.22□□□□□ -0.45
C9orf85Q96MD7 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC12.22□□□□□ -0.45
C9orf85Q96MD7 LINC02199-201ENST00000506655 2702 ntBASIC12.22□□□□□ -0.45
C9orf85Q96MD7 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
C9orf85Q96MD7 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
C9orf85Q96MD7 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
C9orf85Q96MD7 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC12.22□□□□□ -0.45
C9orf85Q96MD7 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
C9orf85Q96MD7 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC12.22□□□□□ -0.45
C9orf85Q96MD7 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
C9orf85Q96MD7 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC12.22□□□□□ -0.45
C9orf85Q96MD7 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
C9orf85Q96MD7 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC12.22□□□□□ -0.45
C9orf85Q96MD7 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC12.22□□□□□ -0.45
C9orf85Q96MD7 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC12.22□□□□□ -0.45
C9orf85Q96MD7 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
C9orf85Q96MD7 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
C9orf85Q96MD7 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
C9orf85Q96MD7 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC12.21□□□□□ -0.45
C9orf85Q96MD7 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
C9orf85Q96MD7 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
C9orf85Q96MD7 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC12.21□□□□□ -0.45
C9orf85Q96MD7 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC12.21□□□□□ -0.45
C9orf85Q96MD7 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
C9orf85Q96MD7 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC12.21□□□□□ -0.45
C9orf85Q96MD7 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC12.21□□□□□ -0.45
C9orf85Q96MD7 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
C9orf85Q96MD7 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
C9orf85Q96MD7 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC12.21□□□□□ -0.45
C9orf85Q96MD7 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC12.21□□□□□ -0.45
C9orf85Q96MD7 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC12.21□□□□□ -0.45
C9orf85Q96MD7 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
C9orf85Q96MD7 COPS8-203ENST00000409334 794 ntTSL 5 BASIC12.21□□□□□ -0.45
C9orf85Q96MD7 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC12.21□□□□□ -0.45
C9orf85Q96MD7 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC12.21□□□□□ -0.45
C9orf85Q96MD7 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC12.21□□□□□ -0.45
C9orf85Q96MD7 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
C9orf85Q96MD7 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
C9orf85Q96MD7 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
C9orf85Q96MD7 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC12.21□□□□□ -0.45
C9orf85Q96MD7 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC12.21□□□□□ -0.45
C9orf85Q96MD7 IGHV3OR16-7-201ENST00000604106 360 ntBASIC12.21□□□□□ -0.45
C9orf85Q96MD7 AC064862.7-201ENST00000604520 867 ntBASIC12.21□□□□□ -0.45
C9orf85Q96MD7 AC092119.3-201ENST00000612618 583 ntBASIC12.21□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 67 ms