Protein–RNA interactions for Protein: Q96J02

ITCH, E3 ubiquitin-protein ligase Itchy homolog, humanhuman

Predictions only

Length 903 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITCHQ96J02 SOD2-201ENST00000337404 991 ntTSL 2 BASIC16.1■□□□□ 0.17
ITCHQ96J02 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
ITCHQ96J02 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ITCHQ96J02 POM121L3P-201ENST00000419331 1163 ntBASIC16.1■□□□□ 0.17
ITCHQ96J02 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC16.1■□□□□ 0.17
ITCHQ96J02 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC16.1■□□□□ 0.17
ITCHQ96J02 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
ITCHQ96J02 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ITCHQ96J02 PAUPAR-201ENST00000630360 2965 ntBASIC16.1■□□□□ 0.17
ITCHQ96J02 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
ITCHQ96J02 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC16.1■□□□□ 0.17
ITCHQ96J02 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
ITCHQ96J02 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
ITCHQ96J02 SIGLEC16-201ENST00000599858 1437 ntBASIC16.1■□□□□ 0.17
ITCHQ96J02 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ITCHQ96J02 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC16.1■□□□□ 0.17
ITCHQ96J02 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
ITCHQ96J02 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC16.09■□□□□ 0.17
ITCHQ96J02 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
ITCHQ96J02 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
ITCHQ96J02 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC16.09■□□□□ 0.17
ITCHQ96J02 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
ITCHQ96J02 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC16.09■□□□□ 0.17
ITCHQ96J02 AC006538.1-201ENST00000567905 1585 ntBASIC16.09■□□□□ 0.17
ITCHQ96J02 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC16.09■□□□□ 0.17
ITCHQ96J02 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
ITCHQ96J02 HNRNPRP1-201ENST00000453465 1695 ntBASIC16.09■□□□□ 0.17
ITCHQ96J02 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC16.09■□□□□ 0.17
ITCHQ96J02 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
ITCHQ96J02 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
ITCHQ96J02 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
ITCHQ96J02 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC16.09■□□□□ 0.17
ITCHQ96J02 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
ITCHQ96J02 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
ITCHQ96J02 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
ITCHQ96J02 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC16.09■□□□□ 0.17
ITCHQ96J02 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC16.09■□□□□ 0.17
ITCHQ96J02 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
ITCHQ96J02 LINC00982-205ENST00000420957 435 ntBASIC16.09■□□□□ 0.17
ITCHQ96J02 IGHV3-47-201ENST00000425060 335 ntBASIC16.09■□□□□ 0.17
ITCHQ96J02 LINC00265-3P-201ENST00000447588 903 ntBASIC16.09■□□□□ 0.17
ITCHQ96J02 AP002414.4-201ENST00000589764 1148 ntBASIC16.09■□□□□ 0.17
ITCHQ96J02 COPE-211ENST00000600932 1144 ntTSL 5 BASIC16.09■□□□□ 0.17
ITCHQ96J02 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
ITCHQ96J02 AC116407.4-201ENST00000623319 1061 ntBASIC16.09■□□□□ 0.17
ITCHQ96J02 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
ITCHQ96J02 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC16.09■□□□□ 0.17
ITCHQ96J02 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
ITCHQ96J02 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
ITCHQ96J02 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
ITCHQ96J02 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC16.09■□□□□ 0.17
ITCHQ96J02 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
ITCHQ96J02 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
ITCHQ96J02 ALOX12P2-203ENST00000570921 1945 ntBASIC16.09■□□□□ 0.17
ITCHQ96J02 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
ITCHQ96J02 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
ITCHQ96J02 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC16.09■□□□□ 0.17
ITCHQ96J02 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC16.09■□□□□ 0.17
ITCHQ96J02 AC092364.2-201ENST00000596710 2692 ntBASIC16.09■□□□□ 0.17
ITCHQ96J02 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
ITCHQ96J02 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
ITCHQ96J02 AC004817.3-201ENST00000602957 2129 ntBASIC16.09■□□□□ 0.17
ITCHQ96J02 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
ITCHQ96J02 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
ITCHQ96J02 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC16.09■□□□□ 0.17
ITCHQ96J02 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC16.09■□□□□ 0.17
ITCHQ96J02 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
ITCHQ96J02 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
ITCHQ96J02 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
ITCHQ96J02 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.17
ITCHQ96J02 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
ITCHQ96J02 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
ITCHQ96J02 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
ITCHQ96J02 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
ITCHQ96J02 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
ITCHQ96J02 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
ITCHQ96J02 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC16.08■□□□□ 0.16
ITCHQ96J02 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
ITCHQ96J02 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC16.08■□□□□ 0.16
ITCHQ96J02 AP002383.4-201ENST00000442518 975 ntBASIC16.08■□□□□ 0.16
ITCHQ96J02 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
ITCHQ96J02 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
ITCHQ96J02 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC16.08■□□□□ 0.16
ITCHQ96J02 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC16.08■□□□□ 0.16
ITCHQ96J02 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC16.08■□□□□ 0.16
ITCHQ96J02 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC16.08■□□□□ 0.16
ITCHQ96J02 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC16.08■□□□□ 0.16
ITCHQ96J02 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC16.08■□□□□ 0.16
ITCHQ96J02 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC16.08■□□□□ 0.16
ITCHQ96J02 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
ITCHQ96J02 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC16.08■□□□□ 0.16
ITCHQ96J02 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC16.08■□□□□ 0.16
ITCHQ96J02 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC16.08■□□□□ 0.16
ITCHQ96J02 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
ITCHQ96J02 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
ITCHQ96J02 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
ITCHQ96J02 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
ITCHQ96J02 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
ITCHQ96J02 KRT8P49-201ENST00000604166 1432 ntBASIC16.08■□□□□ 0.16
ITCHQ96J02 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms