Protein–RNA interactions for Protein: Q96GM5

SMARCD1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1Q96GM5 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
SMARCD1Q96GM5 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC17.66■□□□□ 0.42
SMARCD1Q96GM5 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC17.66■□□□□ 0.42
SMARCD1Q96GM5 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC17.66■□□□□ 0.42
SMARCD1Q96GM5 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC17.66■□□□□ 0.42
SMARCD1Q96GM5 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SMARCD1Q96GM5 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC17.66■□□□□ 0.42
SMARCD1Q96GM5 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC17.66■□□□□ 0.42
SMARCD1Q96GM5 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
SMARCD1Q96GM5 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
SMARCD1Q96GM5 AC012313.1-201ENST00000593393 3059 ntBASIC17.66■□□□□ 0.42
SMARCD1Q96GM5 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SMARCD1Q96GM5 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
SMARCD1Q96GM5 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SMARCD1Q96GM5 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC17.66■□□□□ 0.42
SMARCD1Q96GM5 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SMARCD1Q96GM5 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
SMARCD1Q96GM5 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SMARCD1Q96GM5 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SMARCD1Q96GM5 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SMARCD1Q96GM5 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
SMARCD1Q96GM5 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SMARCD1Q96GM5 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SMARCD1Q96GM5 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SMARCD1Q96GM5 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
SMARCD1Q96GM5 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC17.65■□□□□ 0.42
SMARCD1Q96GM5 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SMARCD1Q96GM5 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
SMARCD1Q96GM5 AL671710.1-201ENST00000610245 2349 ntBASIC17.65■□□□□ 0.42
SMARCD1Q96GM5 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SMARCD1Q96GM5 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SMARCD1Q96GM5 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
SMARCD1Q96GM5 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SMARCD1Q96GM5 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
SMARCD1Q96GM5 RN7SL589P-201ENST00000481268 310 ntBASIC17.65■□□□□ 0.42
SMARCD1Q96GM5 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SMARCD1Q96GM5 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC17.65■□□□□ 0.42
SMARCD1Q96GM5 AP000344.2-201ENST00000512987 629 ntBASIC17.65■□□□□ 0.42
SMARCD1Q96GM5 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC17.65■□□□□ 0.42
SMARCD1Q96GM5 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC17.65■□□□□ 0.42
SMARCD1Q96GM5 AP001160.2-201ENST00000596071 487 ntBASIC17.65■□□□□ 0.42
SMARCD1Q96GM5 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC17.65■□□□□ 0.42
SMARCD1Q96GM5 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC17.65■□□□□ 0.42
SMARCD1Q96GM5 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
SMARCD1Q96GM5 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC17.65■□□□□ 0.42
SMARCD1Q96GM5 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC17.65■□□□□ 0.42
SMARCD1Q96GM5 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
SMARCD1Q96GM5 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC17.65■□□□□ 0.42
SMARCD1Q96GM5 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SMARCD1Q96GM5 AKAP8P1-201ENST00000434743 1349 ntBASIC17.65■□□□□ 0.42
SMARCD1Q96GM5 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC17.65■□□□□ 0.42
SMARCD1Q96GM5 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SMARCD1Q96GM5 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SMARCD1Q96GM5 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SMARCD1Q96GM5 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SMARCD1Q96GM5 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SMARCD1Q96GM5 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
SMARCD1Q96GM5 KRT8P39-201ENST00000396270 1433 ntBASIC17.64■□□□□ 0.42
SMARCD1Q96GM5 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
SMARCD1Q96GM5 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
SMARCD1Q96GM5 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SMARCD1Q96GM5 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SMARCD1Q96GM5 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
SMARCD1Q96GM5 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SMARCD1Q96GM5 SNX33P1-201ENST00000592116 1762 ntBASIC17.64■□□□□ 0.41
SMARCD1Q96GM5 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SMARCD1Q96GM5 STOM-202ENST00000347359 870 ntTSL 2 BASIC17.64■□□□□ 0.41
SMARCD1Q96GM5 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SMARCD1Q96GM5 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC17.64■□□□□ 0.41
SMARCD1Q96GM5 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC17.64■□□□□ 0.41
SMARCD1Q96GM5 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC17.64■□□□□ 0.41
SMARCD1Q96GM5 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC17.64■□□□□ 0.41
SMARCD1Q96GM5 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC17.64■□□□□ 0.41
SMARCD1Q96GM5 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC17.64■□□□□ 0.41
SMARCD1Q96GM5 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
SMARCD1Q96GM5 SNHG9-202ENST00000564014 471 ntBASIC17.64■□□□□ 0.41
SMARCD1Q96GM5 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC17.64■□□□□ 0.41
SMARCD1Q96GM5 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC17.64■□□□□ 0.41
SMARCD1Q96GM5 AC026120.1-201ENST00000611536 926 ntBASIC17.64■□□□□ 0.41
SMARCD1Q96GM5 AL513210.1-201ENST00000629608 234 ntBASIC17.64■□□□□ 0.41
SMARCD1Q96GM5 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SMARCD1Q96GM5 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SMARCD1Q96GM5 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SMARCD1Q96GM5 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC17.64■□□□□ 0.41
SMARCD1Q96GM5 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SMARCD1Q96GM5 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
SMARCD1Q96GM5 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
SMARCD1Q96GM5 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC17.64■□□□□ 0.41
SMARCD1Q96GM5 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC17.64■□□□□ 0.41
SMARCD1Q96GM5 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SMARCD1Q96GM5 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SMARCD1Q96GM5 WASH6P-202ENST00000359512 1437 ntBASIC17.64■□□□□ 0.41
SMARCD1Q96GM5 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SMARCD1Q96GM5 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SMARCD1Q96GM5 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SMARCD1Q96GM5 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SMARCD1Q96GM5 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC17.63■□□□□ 0.41
SMARCD1Q96GM5 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SMARCD1Q96GM5 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC17.63■□□□□ 0.41
SMARCD1Q96GM5 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms