Protein–RNA interactions for Protein: Q969V3

NCLN, Nicalin, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCLNQ969V3 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NCLNQ969V3 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC16.41■□□□□ 0.22
NCLNQ969V3 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
NCLNQ969V3 RBM17P3-201ENST00000417687 1192 ntBASIC16.41■□□□□ 0.22
NCLNQ969V3 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC16.41■□□□□ 0.22
NCLNQ969V3 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC16.41■□□□□ 0.22
NCLNQ969V3 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NCLNQ969V3 SRP19-202ENST00000445150 833 ntTSL 2 BASIC16.41■□□□□ 0.22
NCLNQ969V3 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC16.41■□□□□ 0.22
NCLNQ969V3 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC16.41■□□□□ 0.22
NCLNQ969V3 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC16.41■□□□□ 0.22
NCLNQ969V3 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC16.41■□□□□ 0.22
NCLNQ969V3 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NCLNQ969V3 AP005117.1-201ENST00000584346 1413 ntBASIC16.41■□□□□ 0.22
NCLNQ969V3 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
NCLNQ969V3 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NCLNQ969V3 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NCLNQ969V3 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
NCLNQ969V3 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
NCLNQ969V3 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC16.41■□□□□ 0.22
NCLNQ969V3 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC16.41■□□□□ 0.22
NCLNQ969V3 AC092053.1-201ENST00000605787 1936 ntBASIC16.41■□□□□ 0.22
NCLNQ969V3 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
NCLNQ969V3 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NCLNQ969V3 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
NCLNQ969V3 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
NCLNQ969V3 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
NCLNQ969V3 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
NCLNQ969V3 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NCLNQ969V3 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NCLNQ969V3 AC046158.3-201ENST00000624947 2558 ntBASIC16.4■□□□□ 0.22
NCLNQ969V3 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
NCLNQ969V3 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC16.4■□□□□ 0.22
NCLNQ969V3 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
NCLNQ969V3 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
NCLNQ969V3 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
NCLNQ969V3 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
NCLNQ969V3 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NCLNQ969V3 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
NCLNQ969V3 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NCLNQ969V3 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NCLNQ969V3 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
NCLNQ969V3 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
NCLNQ969V3 IRF8-202ENST00000562492 946 ntTSL 3 BASIC16.4■□□□□ 0.22
NCLNQ969V3 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC16.4■□□□□ 0.22
NCLNQ969V3 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
NCLNQ969V3 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
NCLNQ969V3 AL355877.3-201ENST00000622820 899 ntBASIC16.4■□□□□ 0.22
NCLNQ969V3 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
NCLNQ969V3 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC16.4■□□□□ 0.22
NCLNQ969V3 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
NCLNQ969V3 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC16.4■□□□□ 0.22
NCLNQ969V3 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
NCLNQ969V3 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC16.4■□□□□ 0.22
NCLNQ969V3 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
NCLNQ969V3 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
NCLNQ969V3 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
NCLNQ969V3 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
NCLNQ969V3 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC16.4■□□□□ 0.22
NCLNQ969V3 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
NCLNQ969V3 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
NCLNQ969V3 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
NCLNQ969V3 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
NCLNQ969V3 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
NCLNQ969V3 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
NCLNQ969V3 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
NCLNQ969V3 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC16.4■□□□□ 0.22
NCLNQ969V3 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.22
NCLNQ969V3 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NCLNQ969V3 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NCLNQ969V3 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC16.39■□□□□ 0.21
NCLNQ969V3 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NCLNQ969V3 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC16.39■□□□□ 0.21
NCLNQ969V3 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC16.39■□□□□ 0.21
NCLNQ969V3 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
NCLNQ969V3 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC16.39■□□□□ 0.21
NCLNQ969V3 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
NCLNQ969V3 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NCLNQ969V3 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
NCLNQ969V3 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC16.39■□□□□ 0.21
NCLNQ969V3 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC16.39■□□□□ 0.21
NCLNQ969V3 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
NCLNQ969V3 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
NCLNQ969V3 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC16.39■□□□□ 0.21
NCLNQ969V3 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
NCLNQ969V3 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NCLNQ969V3 SOD2-201ENST00000337404 991 ntTSL 2 BASIC16.39■□□□□ 0.21
NCLNQ969V3 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NCLNQ969V3 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NCLNQ969V3 AC026396.1-201ENST00000419388 421 ntBASIC16.39■□□□□ 0.21
NCLNQ969V3 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC16.39■□□□□ 0.21
NCLNQ969V3 AC002558.1-201ENST00000488906 803 ntBASIC16.39■□□□□ 0.21
NCLNQ969V3 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC16.39■□□□□ 0.21
NCLNQ969V3 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC16.39■□□□□ 0.21
NCLNQ969V3 AC104692.2-201ENST00000603054 253 ntBASIC16.39■□□□□ 0.21
NCLNQ969V3 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NCLNQ969V3 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
NCLNQ969V3 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
NCLNQ969V3 AD001527.2-201ENST00000622994 785 ntBASIC16.39■□□□□ 0.21
NCLNQ969V3 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms