Protein–RNA interactions for Protein: Q969T4

UBE2E3, Ubiquitin-conjugating enzyme E2 E3, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3Q969T4 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC16.2■□□□□ 0.18
UBE2E3Q969T4 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC16.2■□□□□ 0.18
UBE2E3Q969T4 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
UBE2E3Q969T4 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
UBE2E3Q969T4 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC16.2■□□□□ 0.18
UBE2E3Q969T4 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
UBE2E3Q969T4 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC16.2■□□□□ 0.18
UBE2E3Q969T4 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
UBE2E3Q969T4 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
UBE2E3Q969T4 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC16.2■□□□□ 0.18
UBE2E3Q969T4 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
UBE2E3Q969T4 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
UBE2E3Q969T4 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
UBE2E3Q969T4 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
UBE2E3Q969T4 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
UBE2E3Q969T4 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
UBE2E3Q969T4 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
UBE2E3Q969T4 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
UBE2E3Q969T4 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
UBE2E3Q969T4 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
UBE2E3Q969T4 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC16.2■□□□□ 0.18
UBE2E3Q969T4 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC16.2■□□□□ 0.18
UBE2E3Q969T4 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC16.2■□□□□ 0.18
UBE2E3Q969T4 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC16.2■□□□□ 0.18
UBE2E3Q969T4 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC16.2■□□□□ 0.18
UBE2E3Q969T4 RIN3-211ENST00000557762 517 ntTSL 3 BASIC16.2■□□□□ 0.18
UBE2E3Q969T4 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC16.2■□□□□ 0.18
UBE2E3Q969T4 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC16.2■□□□□ 0.18
UBE2E3Q969T4 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
UBE2E3Q969T4 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC16.2■□□□□ 0.18
UBE2E3Q969T4 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC16.2■□□□□ 0.18
UBE2E3Q969T4 AC148477.8-201ENST00000624298 468 ntBASIC16.2■□□□□ 0.18
UBE2E3Q969T4 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
UBE2E3Q969T4 AP002414.3-201ENST00000589352 1468 ntBASIC16.2■□□□□ 0.18
UBE2E3Q969T4 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
UBE2E3Q969T4 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
UBE2E3Q969T4 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
UBE2E3Q969T4 AL603756.1-201ENST00000606511 2163 ntBASIC16.2■□□□□ 0.18
UBE2E3Q969T4 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
UBE2E3Q969T4 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
UBE2E3Q969T4 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
UBE2E3Q969T4 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC16.2■□□□□ 0.18
UBE2E3Q969T4 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC16.2■□□□□ 0.18
UBE2E3Q969T4 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC16.19■□□□□ 0.18
UBE2E3Q969T4 PC-204ENST00000524491 1714 ntTSL 2 BASIC16.19■□□□□ 0.18
UBE2E3Q969T4 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
UBE2E3Q969T4 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC16.19■□□□□ 0.18
UBE2E3Q969T4 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
UBE2E3Q969T4 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC16.19■□□□□ 0.18
UBE2E3Q969T4 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
UBE2E3Q969T4 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC16.19■□□□□ 0.18
UBE2E3Q969T4 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
UBE2E3Q969T4 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
UBE2E3Q969T4 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
UBE2E3Q969T4 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
UBE2E3Q969T4 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
UBE2E3Q969T4 HCG4-201ENST00000418983 998 ntBASIC16.19■□□□□ 0.18
UBE2E3Q969T4 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC16.19■□□□□ 0.18
UBE2E3Q969T4 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC16.19■□□□□ 0.18
UBE2E3Q969T4 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC16.19■□□□□ 0.18
UBE2E3Q969T4 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC16.19■□□□□ 0.18
UBE2E3Q969T4 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC16.19■□□□□ 0.18
UBE2E3Q969T4 AC012640.2-201ENST00000561606 901 ntBASIC16.19■□□□□ 0.18
UBE2E3Q969T4 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
UBE2E3Q969T4 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC16.19■□□□□ 0.18
UBE2E3Q969T4 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
UBE2E3Q969T4 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
UBE2E3Q969T4 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
UBE2E3Q969T4 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
UBE2E3Q969T4 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC16.19■□□□□ 0.18
UBE2E3Q969T4 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
UBE2E3Q969T4 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
UBE2E3Q969T4 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
UBE2E3Q969T4 AC131009.4-201ENST00000624048 1740 ntBASIC16.19■□□□□ 0.18
UBE2E3Q969T4 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
UBE2E3Q969T4 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC16.19■□□□□ 0.18
UBE2E3Q969T4 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
UBE2E3Q969T4 HLA-A-202ENST00000376806 1854 ntBASIC16.18■□□□□ 0.18
UBE2E3Q969T4 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
UBE2E3Q969T4 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
UBE2E3Q969T4 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC16.18■□□□□ 0.18
UBE2E3Q969T4 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
UBE2E3Q969T4 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
UBE2E3Q969T4 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC16.18■□□□□ 0.18
UBE2E3Q969T4 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
UBE2E3Q969T4 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
UBE2E3Q969T4 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
UBE2E3Q969T4 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
UBE2E3Q969T4 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC16.18■□□□□ 0.18
UBE2E3Q969T4 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
UBE2E3Q969T4 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
UBE2E3Q969T4 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
UBE2E3Q969T4 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
UBE2E3Q969T4 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC16.18■□□□□ 0.18
UBE2E3Q969T4 CIPC-205ENST00000555437 566 ntTSL 3 BASIC16.18■□□□□ 0.18
UBE2E3Q969T4 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC16.18■□□□□ 0.18
UBE2E3Q969T4 AP001005.1-201ENST00000571755 1248 ntBASIC16.18■□□□□ 0.18
UBE2E3Q969T4 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC16.18■□□□□ 0.18
UBE2E3Q969T4 AC010654.1-201ENST00000615722 808 ntBASIC16.18■□□□□ 0.18
UBE2E3Q969T4 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC16.18■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 59.5 ms