Protein–RNA interactions for Protein: Q92629

SGCD, Delta-sarcoglycan, humanhuman

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCDQ92629 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC15.45■□□□□ 0.06
SGCDQ92629 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
SGCDQ92629 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC15.45■□□□□ 0.06
SGCDQ92629 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC15.45■□□□□ 0.06
SGCDQ92629 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
SGCDQ92629 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC15.45■□□□□ 0.06
SGCDQ92629 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
SGCDQ92629 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
SGCDQ92629 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
SGCDQ92629 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC15.45■□□□□ 0.06
SGCDQ92629 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
SGCDQ92629 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
SGCDQ92629 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC15.45■□□□□ 0.06
SGCDQ92629 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
SGCDQ92629 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
SGCDQ92629 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC15.45■□□□□ 0.06
SGCDQ92629 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
SGCDQ92629 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
SGCDQ92629 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
SGCDQ92629 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
SGCDQ92629 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
SGCDQ92629 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC15.45■□□□□ 0.06
SGCDQ92629 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC15.45■□□□□ 0.06
SGCDQ92629 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
SGCDQ92629 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
SGCDQ92629 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
SGCDQ92629 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
SGCDQ92629 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
SGCDQ92629 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC15.44■□□□□ 0.06
SGCDQ92629 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC15.44■□□□□ 0.06
SGCDQ92629 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC15.44■□□□□ 0.06
SGCDQ92629 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC15.44■□□□□ 0.06
SGCDQ92629 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC15.44■□□□□ 0.06
SGCDQ92629 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC15.44■□□□□ 0.06
SGCDQ92629 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC15.44■□□□□ 0.06
SGCDQ92629 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
SGCDQ92629 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
SGCDQ92629 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
SGCDQ92629 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC15.44■□□□□ 0.06
SGCDQ92629 AC087499.1-201ENST00000418141 1075 ntBASIC15.44■□□□□ 0.06
SGCDQ92629 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC15.44■□□□□ 0.06
SGCDQ92629 MTCL1P1-201ENST00000446207 792 ntBASIC15.44■□□□□ 0.06
SGCDQ92629 CNP-204ENST00000472031 1019 ntTSL 2 BASIC15.44■□□□□ 0.06
SGCDQ92629 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
SGCDQ92629 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
SGCDQ92629 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC15.44■□□□□ 0.06
SGCDQ92629 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC15.44■□□□□ 0.06
SGCDQ92629 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC15.44■□□□□ 0.06
SGCDQ92629 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC15.44■□□□□ 0.06
SGCDQ92629 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC15.44■□□□□ 0.06
SGCDQ92629 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
SGCDQ92629 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC15.44■□□□□ 0.06
SGCDQ92629 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC15.44■□□□□ 0.06
SGCDQ92629 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
SGCDQ92629 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
SGCDQ92629 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
SGCDQ92629 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
SGCDQ92629 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
SGCDQ92629 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC15.44■□□□□ 0.06
SGCDQ92629 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
SGCDQ92629 WARS-232ENST00000556645 2508 ntTSL 5 BASIC15.44■□□□□ 0.06
SGCDQ92629 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC15.44■□□□□ 0.06
SGCDQ92629 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
SGCDQ92629 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC15.44■□□□□ 0.06
SGCDQ92629 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC15.44■□□□□ 0.06
SGCDQ92629 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC15.44■□□□□ 0.06
SGCDQ92629 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
SGCDQ92629 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SGCDQ92629 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC15.43■□□□□ 0.06
SGCDQ92629 PPT1-215ENST00000641471 2368 ntBASIC15.43■□□□□ 0.06
SGCDQ92629 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
SGCDQ92629 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SGCDQ92629 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SGCDQ92629 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SGCDQ92629 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
SGCDQ92629 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC15.43■□□□□ 0.06
SGCDQ92629 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
SGCDQ92629 PRAL-201ENST00000624952 3286 ntBASIC15.43■□□□□ 0.06
SGCDQ92629 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SGCDQ92629 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
SGCDQ92629 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SGCDQ92629 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
SGCDQ92629 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC15.43■□□□□ 0.06
SGCDQ92629 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC15.43■□□□□ 0.06
SGCDQ92629 TK2-213ENST00000563369 882 ntTSL 5 BASIC15.43■□□□□ 0.06
SGCDQ92629 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC15.43■□□□□ 0.06
SGCDQ92629 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC15.43■□□□□ 0.06
SGCDQ92629 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SGCDQ92629 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
SGCDQ92629 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
SGCDQ92629 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
SGCDQ92629 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SGCDQ92629 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SGCDQ92629 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SGCDQ92629 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
SGCDQ92629 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SGCDQ92629 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
SGCDQ92629 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SGCDQ92629 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
SGCDQ92629 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC15.43■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 71 ms