Protein–RNA interactions for Protein: Q8WZA2

RAPGEF4, Rap guanine nucleotide exchange factor 4, humanhuman

Predictions only

Length 1,011 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4Q8WZA2 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
RAPGEF4Q8WZA2 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
RAPGEF4Q8WZA2 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC21.9■■□□□ 1.1
RAPGEF4Q8WZA2 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
RAPGEF4Q8WZA2 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC21.9■■□□□ 1.1
RAPGEF4Q8WZA2 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
RAPGEF4Q8WZA2 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC21.9■■□□□ 1.1
RAPGEF4Q8WZA2 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
RAPGEF4Q8WZA2 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC21.9■■□□□ 1.1
RAPGEF4Q8WZA2 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC21.9■■□□□ 1.1
RAPGEF4Q8WZA2 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC21.9■■□□□ 1.1
RAPGEF4Q8WZA2 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
RAPGEF4Q8WZA2 CETN4P-206ENST00000642099 2168 ntBASIC21.89■■□□□ 1.1
RAPGEF4Q8WZA2 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.1
RAPGEF4Q8WZA2 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.1
RAPGEF4Q8WZA2 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
RAPGEF4Q8WZA2 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC21.89■■□□□ 1.1
RAPGEF4Q8WZA2 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.1
RAPGEF4Q8WZA2 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
RAPGEF4Q8WZA2 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
RAPGEF4Q8WZA2 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
RAPGEF4Q8WZA2 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC21.89■■□□□ 1.09
RAPGEF4Q8WZA2 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
RAPGEF4Q8WZA2 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
RAPGEF4Q8WZA2 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
RAPGEF4Q8WZA2 NME2P1-201ENST00000426182 414 ntBASIC21.89■■□□□ 1.09
RAPGEF4Q8WZA2 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
RAPGEF4Q8WZA2 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC21.89■■□□□ 1.09
RAPGEF4Q8WZA2 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC21.89■■□□□ 1.09
RAPGEF4Q8WZA2 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC21.89■■□□□ 1.09
RAPGEF4Q8WZA2 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC21.89■■□□□ 1.09
RAPGEF4Q8WZA2 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.09
RAPGEF4Q8WZA2 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
RAPGEF4Q8WZA2 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
RAPGEF4Q8WZA2 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC21.89■■□□□ 1.09
RAPGEF4Q8WZA2 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.09
RAPGEF4Q8WZA2 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
RAPGEF4Q8WZA2 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC21.89■■□□□ 1.09
RAPGEF4Q8WZA2 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
RAPGEF4Q8WZA2 AL671710.1-201ENST00000610245 2349 ntBASIC21.89■■□□□ 1.09
RAPGEF4Q8WZA2 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
RAPGEF4Q8WZA2 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
RAPGEF4Q8WZA2 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC21.88■■□□□ 1.09
RAPGEF4Q8WZA2 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC21.88■■□□□ 1.09
RAPGEF4Q8WZA2 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
RAPGEF4Q8WZA2 AC087499.5-201ENST00000452760 1342 ntBASIC21.88■■□□□ 1.09
RAPGEF4Q8WZA2 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC21.88■■□□□ 1.09
RAPGEF4Q8WZA2 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC21.88■■□□□ 1.09
RAPGEF4Q8WZA2 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC21.88■■□□□ 1.09
RAPGEF4Q8WZA2 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
RAPGEF4Q8WZA2 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
RAPGEF4Q8WZA2 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
RAPGEF4Q8WZA2 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
RAPGEF4Q8WZA2 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
RAPGEF4Q8WZA2 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
RAPGEF4Q8WZA2 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
RAPGEF4Q8WZA2 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC21.88■■□□□ 1.09
RAPGEF4Q8WZA2 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
RAPGEF4Q8WZA2 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC21.88■■□□□ 1.09
RAPGEF4Q8WZA2 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC21.88■■□□□ 1.09
RAPGEF4Q8WZA2 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC21.88■■□□□ 1.09
RAPGEF4Q8WZA2 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC21.88■■□□□ 1.09
RAPGEF4Q8WZA2 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC21.88■■□□□ 1.09
RAPGEF4Q8WZA2 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC21.88■■□□□ 1.09
RAPGEF4Q8WZA2 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC21.88■■□□□ 1.09
RAPGEF4Q8WZA2 RN7SL828P-201ENST00000607615 303 ntBASIC21.88■■□□□ 1.09
RAPGEF4Q8WZA2 AL589739.1-201ENST00000607720 493 ntBASIC21.88■■□□□ 1.09
RAPGEF4Q8WZA2 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
RAPGEF4Q8WZA2 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC21.88■■□□□ 1.09
RAPGEF4Q8WZA2 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
RAPGEF4Q8WZA2 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
RAPGEF4Q8WZA2 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC21.88■■□□□ 1.09
RAPGEF4Q8WZA2 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC21.88■■□□□ 1.09
RAPGEF4Q8WZA2 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
RAPGEF4Q8WZA2 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
RAPGEF4Q8WZA2 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
RAPGEF4Q8WZA2 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
RAPGEF4Q8WZA2 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC21.88■■□□□ 1.09
RAPGEF4Q8WZA2 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
RAPGEF4Q8WZA2 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
RAPGEF4Q8WZA2 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
RAPGEF4Q8WZA2 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
RAPGEF4Q8WZA2 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
RAPGEF4Q8WZA2 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
RAPGEF4Q8WZA2 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
RAPGEF4Q8WZA2 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
RAPGEF4Q8WZA2 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
RAPGEF4Q8WZA2 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC21.87■■□□□ 1.09
RAPGEF4Q8WZA2 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC21.87■■□□□ 1.09
RAPGEF4Q8WZA2 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
RAPGEF4Q8WZA2 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
RAPGEF4Q8WZA2 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
RAPGEF4Q8WZA2 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC21.87■■□□□ 1.09
RAPGEF4Q8WZA2 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
RAPGEF4Q8WZA2 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
RAPGEF4Q8WZA2 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC21.87■■□□□ 1.09
RAPGEF4Q8WZA2 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC21.87■■□□□ 1.09
RAPGEF4Q8WZA2 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC21.87■■□□□ 1.09
RAPGEF4Q8WZA2 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC21.87■■□□□ 1.09
RAPGEF4Q8WZA2 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC21.87■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms