Protein–RNA interactions for Protein: Q8WXH6

RAB40A, Ras-related protein Rab-40A, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40AQ8WXH6 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RAB40AQ8WXH6 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
RAB40AQ8WXH6 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RAB40AQ8WXH6 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RAB40AQ8WXH6 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
RAB40AQ8WXH6 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
RAB40AQ8WXH6 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
RAB40AQ8WXH6 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RAB40AQ8WXH6 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RAB40AQ8WXH6 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC14.86□□□□□ -0.03
RAB40AQ8WXH6 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
RAB40AQ8WXH6 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC14.86□□□□□ -0.03
RAB40AQ8WXH6 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
RAB40AQ8WXH6 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC14.86□□□□□ -0.03
RAB40AQ8WXH6 MTCL1P1-201ENST00000446207 792 ntBASIC14.86□□□□□ -0.03
RAB40AQ8WXH6 KRT16P4-201ENST00000453883 522 ntBASIC14.86□□□□□ -0.03
RAB40AQ8WXH6 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC14.86□□□□□ -0.03
RAB40AQ8WXH6 AC091607.1-201ENST00000490318 1060 ntBASIC14.86□□□□□ -0.03
RAB40AQ8WXH6 IGHV3-52-201ENST00000519770 353 ntBASIC14.86□□□□□ -0.03
RAB40AQ8WXH6 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
RAB40AQ8WXH6 RN7SL510P-201ENST00000581311 263 ntBASIC14.86□□□□□ -0.03
RAB40AQ8WXH6 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
RAB40AQ8WXH6 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC14.86□□□□□ -0.03
RAB40AQ8WXH6 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
RAB40AQ8WXH6 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC14.86□□□□□ -0.03
RAB40AQ8WXH6 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC14.86□□□□□ -0.03
RAB40AQ8WXH6 AL732292.2-201ENST00000609649 430 ntBASIC14.86□□□□□ -0.03
RAB40AQ8WXH6 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC14.86□□□□□ -0.03
RAB40AQ8WXH6 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC14.86□□□□□ -0.03
RAB40AQ8WXH6 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
RAB40AQ8WXH6 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RAB40AQ8WXH6 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RAB40AQ8WXH6 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RAB40AQ8WXH6 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
RAB40AQ8WXH6 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
RAB40AQ8WXH6 HLA-A-202ENST00000376806 1854 ntBASIC14.86□□□□□ -0.03
RAB40AQ8WXH6 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RAB40AQ8WXH6 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
RAB40AQ8WXH6 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RAB40AQ8WXH6 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RAB40AQ8WXH6 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC14.86□□□□□ -0.03
RAB40AQ8WXH6 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC14.86□□□□□ -0.03
RAB40AQ8WXH6 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RAB40AQ8WXH6 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RAB40AQ8WXH6 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC14.85□□□□□ -0.03
RAB40AQ8WXH6 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC14.85□□□□□ -0.03
RAB40AQ8WXH6 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC14.85□□□□□ -0.03
RAB40AQ8WXH6 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
RAB40AQ8WXH6 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RAB40AQ8WXH6 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
RAB40AQ8WXH6 F11R-206ENST00000621309 4770 ntTSL 5 BASIC14.85□□□□□ -0.03
RAB40AQ8WXH6 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
RAB40AQ8WXH6 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC14.85□□□□□ -0.03
RAB40AQ8WXH6 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
RAB40AQ8WXH6 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC14.85□□□□□ -0.03
RAB40AQ8WXH6 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC14.85□□□□□ -0.03
RAB40AQ8WXH6 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RAB40AQ8WXH6 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RAB40AQ8WXH6 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC14.85□□□□□ -0.03
RAB40AQ8WXH6 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
RAB40AQ8WXH6 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RAB40AQ8WXH6 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RAB40AQ8WXH6 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
RAB40AQ8WXH6 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RAB40AQ8WXH6 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RAB40AQ8WXH6 COX5BP2-201ENST00000392354 334 ntBASIC14.85□□□□□ -0.03
RAB40AQ8WXH6 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
RAB40AQ8WXH6 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
RAB40AQ8WXH6 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RAB40AQ8WXH6 FAAHP1-202ENST00000446499 1238 ntBASIC14.85□□□□□ -0.03
RAB40AQ8WXH6 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC14.85□□□□□ -0.03
RAB40AQ8WXH6 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC14.85□□□□□ -0.03
RAB40AQ8WXH6 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC14.85□□□□□ -0.03
RAB40AQ8WXH6 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC14.85□□□□□ -0.03
RAB40AQ8WXH6 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RAB40AQ8WXH6 UNC93B7-201ENST00000509439 705 ntBASIC14.85□□□□□ -0.03
RAB40AQ8WXH6 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC14.85□□□□□ -0.03
RAB40AQ8WXH6 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
RAB40AQ8WXH6 FICD-205ENST00000552758 603 ntTSL 2 BASIC14.85□□□□□ -0.03
RAB40AQ8WXH6 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC14.85□□□□□ -0.03
RAB40AQ8WXH6 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC14.85□□□□□ -0.03
RAB40AQ8WXH6 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC14.85□□□□□ -0.03
RAB40AQ8WXH6 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC14.85□□□□□ -0.03
RAB40AQ8WXH6 IFNL4P1-201ENST00000607083 540 ntBASIC14.85□□□□□ -0.03
RAB40AQ8WXH6 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC14.85□□□□□ -0.03
RAB40AQ8WXH6 CCNC-219ENST00000627680 896 ntTSL 5 BASIC14.85□□□□□ -0.03
RAB40AQ8WXH6 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RAB40AQ8WXH6 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
RAB40AQ8WXH6 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RAB40AQ8WXH6 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC14.85□□□□□ -0.03
RAB40AQ8WXH6 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
RAB40AQ8WXH6 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
RAB40AQ8WXH6 MTHFR-217ENST00000641820 1569 ntBASIC14.85□□□□□ -0.03
RAB40AQ8WXH6 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
RAB40AQ8WXH6 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
RAB40AQ8WXH6 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
RAB40AQ8WXH6 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC14.84□□□□□ -0.03
RAB40AQ8WXH6 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RAB40AQ8WXH6 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC14.84□□□□□ -0.03
RAB40AQ8WXH6 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC14.84□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 136.9 ms